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Chlorine in PDB 2jh7: Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine

Protein crystallography data

The structure of Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine, PDB code: 2jh7 was solved by T.M.A.Blumenschein, N.Friedrich, R.A.Childs, S.Saouros, E.P.Carpenter, M.A.Campanero-Rhodes, P.Simpson, T.Koutroukides, M.J.Blackman, T.Feizi, D.Soldati-Favre, S.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.29 / 2.07
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 65.935, 65.935, 172.983, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine (pdb code 2jh7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine, PDB code: 2jh7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2jh7

Go back to Chlorine Binding Sites List in 2jh7
Chlorine binding site 1 out of 2 in the Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1243

b:20.1
occ:1.00
OG A:SER17 3.1 22.1 1.0
O A:HOH2024 3.2 19.4 1.0
N A:ASP90 3.2 18.4 1.0
O2 A:GOL1244 3.3 26.5 1.0
CB A:SER17 3.4 21.3 1.0
SG A:CYS187 3.5 18.9 1.0
CB A:ASP89 3.7 17.5 1.0
C2 A:GOL1244 3.7 21.2 1.0
CB A:CYS187 3.7 18.4 1.0
CB A:ASP90 3.8 16.7 1.0
C1 A:GOL1244 3.8 17.8 1.0
CA A:ASP90 3.9 18.8 1.0
CD A:PRO188 4.0 19.9 1.0
C A:ASP89 4.1 18.7 1.0
CA A:ASP89 4.2 18.9 1.0
CG A:ASP89 4.3 20.1 1.0
CA A:CYS187 4.4 19.0 1.0
CG A:PRO188 4.4 17.7 1.0
C A:ASP90 4.6 19.7 1.0
N A:CYS91 4.6 19.8 1.0
CG A:ASP90 4.7 17.8 1.0
N A:PRO188 4.7 19.9 1.0
OD2 A:ASP89 4.7 20.5 1.0
CA A:SER17 4.8 21.4 1.0
OD1 A:ASP89 4.8 18.6 1.0
O1 A:GOL1244 4.8 17.8 1.0
NH2 A:ARG148 4.8 17.3 1.0
O A:HOH2171 4.9 24.4 1.0

Chlorine binding site 2 out of 2 in 2jh7

Go back to Chlorine Binding Sites List in 2jh7
Chlorine binding site 2 out of 2 in the Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Toxoplasma Gondii Micronemal Protein 1 Bound to 6'-Sialyl-N-Acetyllactosamine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1252

b:37.5
occ:1.00
O A:HOH2086 2.7 24.4 1.0
N A:ILE114 3.2 23.7 1.0
C A:ARG111 3.6 20.0 1.0
CD A:ARG111 3.7 24.1 1.0
N A:GLU113 3.7 24.1 1.0
CA A:ARG111 3.7 20.5 1.0
O A:ARG111 3.7 19.0 1.0
CG2 A:ILE114 3.8 24.2 1.0
CB A:GLU113 3.8 23.4 1.0
CB A:ILE114 3.9 25.5 1.0
CB A:ARG111 4.0 19.8 1.0
N A:HIS112 4.0 20.8 1.0
CA A:GLU113 4.1 23.3 1.0
C A:GLU113 4.1 22.9 1.0
CA A:ILE114 4.1 24.4 1.0
OE1 A:GLU113 4.3 21.0 1.0
CG A:ARG111 4.5 20.7 1.0
C A:HIS112 4.6 23.6 1.0
CG A:GLU113 4.7 24.6 1.0
O A:HOH2085 4.7 21.6 1.0
NE A:ARG111 4.8 24.3 1.0
CD A:GLU113 4.9 25.2 1.0
CA A:HIS112 4.9 22.2 1.0

Reference:

T.M.A.Blumenschein, N.Friedrich, R.A.Childs, S.Saouros, E.P.Carpenter, M.A.Campanero-Rhodes, P.Simpson, W.Chai, T.Koutroukides, M.J.Blackman, T.Feizi, D.Soldati-Favre, S.Matthews. Atomic Resolution Insight Into Host Cell Recognition By Toxoplasma Gondii. Embo J. V. 26 2808 2007.
ISSN: ISSN 0261-4189
PubMed: 17491595
DOI: 10.1038/SJ.EMBOJ.7601704
Page generated: Sat Jul 20 08:53:22 2024

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