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Chlorine in PDB 2jhq: Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae

Enzymatic activity of Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae

All present enzymatic activity of Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae:
3.2.2.3;

Protein crystallography data

The structure of Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae, PDB code: 2jhq was solved by I.L.U.Raeder, E.Moe, N.P.Willassen, A.O.Smalas, I.Leiros, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.31 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.140, 60.440, 61.330, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae (pdb code 2jhq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae, PDB code: 2jhq:

Chlorine binding site 1 out of 1 in 2jhq

Go back to Chlorine Binding Sites List in 2jhq
Chlorine binding site 1 out of 1 in the Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Uracil Dna-Glycosylase From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1227

b:11.9
occ:1.00
OG A:SER88 3.1 7.5 1.0
O A:HOH2059 3.1 25.9 1.0
N A:SER88 3.2 6.3 1.0
CB A:SER88 3.5 7.0 1.0
CD A:PRO87 3.7 7.8 1.0
CE1 A:TYR66 3.8 9.8 1.0
CA A:SER88 3.9 6.9 1.0
N A:PRO87 3.9 6.9 1.0
CB A:PRO87 4.1 7.9 1.0
C A:PRO87 4.2 6.5 1.0
CG A:PRO87 4.3 8.1 1.0
CB A:PRO86 4.3 6.8 1.0
CA A:PRO87 4.3 7.1 1.0
CD1 A:TYR66 4.5 9.2 1.0
C A:PRO86 4.5 6.0 1.0
O A:HOH2050 4.7 30.5 1.0
OH A:TYR66 4.8 9.1 1.0
CZ A:TYR66 4.8 9.1 1.0
CA A:PRO86 5.0 6.8 1.0

Reference:

I.L.U.Raeder, E.Moe, N.P.Willassen, A.O.Smalas, I.Leiros. Structure of Uracil-Dna N-Glycosylase (Ung) From Vibrio Cholerae. Mapping Temperature Adaptation Through Structural and Mutational Analysis. Acta Crystallogr.,Sect.F V. 66 130 2010.
ISSN: ISSN 1744-3091
PubMed: 20124707
DOI: 10.1107/S1744309109052063
Page generated: Sat Dec 12 09:10:49 2020

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