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Chlorine in PDB 2jij: Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I

Protein crystallography data

The structure of Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I, PDB code: 2jij was solved by M.K.Koski, R.Hieta, C.Bollner, K.I.Kivirikko, J.Myllyharju, R.K.Wierenga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.83 / 2.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 98.320, 117.460, 72.040, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 26.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I (pdb code 2jij). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I, PDB code: 2jij:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2jij

Go back to Chlorine Binding Sites List in 2jij
Chlorine binding site 1 out of 2 in the Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:59.7
occ:1.00
OG1 A:THR178 2.9 37.5 1.0
NZ A:LYS237 3.5 33.7 1.0
CG2 A:THR178 3.7 37.3 1.0
CD1 A:LEU166 3.7 40.2 1.0
CB A:THR178 3.8 36.9 1.0
CD2 A:LEU166 3.8 41.9 1.0
CB A:SER229 3.9 37.4 1.0
CA A:THR178 4.1 36.9 1.0
O A:GLY228 4.2 38.4 1.0
CA A:SER229 4.3 37.7 1.0
OG A:SER229 4.3 37.4 1.0
CE A:LYS237 4.3 33.4 1.0
CG A:LEU166 4.4 39.8 1.0
C A:GLY228 4.6 38.6 1.0
N A:SER229 4.7 38.2 1.0
N A:THR178 4.9 37.1 1.0
CE1 A:TYR168 5.0 37.5 1.0
CD2 A:HIS227 5.0 40.7 1.0

Chlorine binding site 2 out of 2 in 2jij

Go back to Chlorine Binding Sites List in 2jij
Chlorine binding site 2 out of 2 in the Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Apo Form of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl2

b:60.9
occ:1.00
NZ C:LYS237 2.9 38.0 1.0
OG1 C:THR178 3.0 37.5 1.0
CB C:SER229 3.6 37.6 1.0
CE C:LYS237 3.7 38.4 1.0
CB C:THR178 3.8 37.1 1.0
CG2 C:THR178 3.8 37.3 1.0
OG C:SER229 3.8 37.1 1.0
CA C:THR178 4.0 37.1 1.0
CA C:SER229 4.1 37.9 1.0
O C:GLY228 4.1 38.8 1.0
OH C:TYR134 4.2 37.0 1.0
CD1 C:LEU166 4.2 40.3 1.0
CD2 C:LEU166 4.3 41.8 1.0
N C:THR178 4.5 37.1 1.0
C C:GLY228 4.6 38.6 1.0
N C:SER229 4.6 38.1 1.0
CZ C:TYR134 4.8 37.1 1.0
CG C:LEU166 4.9 39.8 1.0
CE2 C:TYR134 5.0 36.5 1.0
CE1 C:TYR168 5.0 37.2 1.0
CD C:LYS237 5.0 38.0 1.0

Reference:

M.K.Koski, R.Hieta, C.Bollner, K.I.Kivirikko, J.Myllyharju, R.K.Wierenga. The Active Site of An Algal Prolyl 4-Hydroxylase Has A Large Structural Plasticity. J.Biol.Chem. V. 282 37112 2007.
ISSN: ISSN 0021-9258
PubMed: 17940281
DOI: 10.1074/JBC.M706554200
Page generated: Sat Jul 20 08:54:07 2024

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