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Chlorine in PDB 2jjl: Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form

Protein crystallography data

The structure of Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form, PDB code: 2jjl was solved by P.Guardado-Calvo, G.C.Fox, A.L.Llamas-Saiz, J.Benavente, M.J.Van Raaij, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 2.30
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.657, 77.657, 121.449, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 22

Other elements in 2jjl:

The structure of Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form (pdb code 2jjl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form, PDB code: 2jjl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2jjl

Go back to Chlorine Binding Sites List in 2jjl
Chlorine binding site 1 out of 2 in the Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1327

b:29.8
occ:0.33
ND2 A:ASN124 3.1 22.3 1.0
CB A:ASN124 3.8 23.7 1.0
CG A:ASN124 4.0 35.8 1.0
CA A:VAL121 4.2 42.8 1.0
CG2 A:VAL121 4.5 39.4 1.0
CB A:VAL121 4.7 39.5 1.0
O A:THR120 4.8 44.9 1.0
CG1 A:VAL121 4.8 36.1 1.0
O A:VAL121 4.8 35.1 1.0

Chlorine binding site 2 out of 2 in 2jjl

Go back to Chlorine Binding Sites List in 2jjl
Chlorine binding site 2 out of 2 in the Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Avian Reovirus SIGMAC117-326, P321 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1328

b:45.7
occ:0.33
ND2 A:ASN138 3.2 37.5 1.0
CB A:ASN138 3.8 40.7 1.0
CG A:ASN138 4.0 39.5 1.0
CA A:ILE135 4.2 40.7 1.0
CG1 A:ILE135 4.2 39.1 1.0
CB A:ILE135 4.5 40.6 1.0
CG2 A:ILE135 4.6 31.6 1.0
O A:ILE135 4.6 44.3 1.0
C A:ILE135 4.9 44.6 1.0

Reference:

P.Guardado-Calvo, G.C.Fox, A.L.Llamas-Saiz, M.J.Van Raaij. Crystallographic Structure of the Alpha-Helical Triple Coiled-Coil Domain of Avian Reovirus S1133 Fibre. J. Gen. Virol. V. 90 672 2009.
ISSN: ISSN 0022-1317
PubMed: 19218213
DOI: 10.1099/VIR.0.008276-0
Page generated: Sat Jul 20 08:55:53 2024

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