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Chlorine in PDB 2o0r: The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis

Protein crystallography data

The structure of The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis, PDB code: 2o0r was solved by S.Weyand, G.Kefala, M.S.Weiss, Tb Structural Genomics Consortium (Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group P 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 54.340, 56.130, 247.470, 90.00, 90.00, 90.00
R / Rfree (%) 16.4 / 21.3

Other elements in 2o0r:

The structure of The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis (pdb code 2o0r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis, PDB code: 2o0r:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2o0r

Go back to Chlorine Binding Sites List in 2o0r
Chlorine binding site 1 out of 2 in the The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:11.8
occ:1.00
OG1 A:THR179 2.9 13.5 1.0
N A:THR179 3.3 11.8 1.0
CB A:THR179 3.6 13.5 1.0
N A:ALA178 3.8 12.2 1.0
CB A:SER177 3.9 13.4 1.0
CB A:ALA178 4.0 10.9 1.0
CA A:THR179 4.0 13.1 1.0
C A:ALA178 4.2 11.3 1.0
OG A:SER177 4.2 11.3 1.0
CA A:ALA178 4.2 12.1 1.0
C A:SER177 4.5 13.4 1.0
CA A:SER177 4.7 12.7 1.0
O A:HOH886 4.8 13.4 1.0
O A:HOH811 4.9 21.5 1.0

Chlorine binding site 2 out of 2 in 2o0r

Go back to Chlorine Binding Sites List in 2o0r
Chlorine binding site 2 out of 2 in the The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:12.9
occ:1.00
OG1 B:THR179 3.2 16.0 1.0
N B:THR179 3.4 12.4 1.0
N B:ALA178 3.7 11.4 1.0
CB B:SER177 3.8 10.8 1.0
CB B:THR179 3.8 12.5 1.0
O B:HOH710 3.9 5.1 1.0
CB B:ALA178 4.0 11.4 1.0
OG B:SER177 4.1 10.7 1.0
CA B:ALA178 4.2 11.2 1.0
CA B:THR179 4.2 12.9 1.0
C B:ALA178 4.2 11.1 1.0
C B:SER177 4.4 11.1 1.0
CA B:SER177 4.6 10.6 1.0
O B:HOH800 5.0 17.8 1.0

Reference:

S.Weyand, G.Kefala, M.S.Weiss. The Three-Dimensional Structure of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis J.Mol.Biol. V. 367 825 2007.
ISSN: ISSN 0022-2836
PubMed: 17292400
DOI: 10.1016/J.JMB.2007.01.023
Page generated: Sat Dec 12 09:12:24 2020

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