Chlorine in PDB 2o6i: Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase

The structure of Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase, PDB code: 2o6i was solved by I.I.Vorontsov, G.Minasov, L.Shuvalova, J.S.Brunzelle, S.Moy, F.R.Collart, A.Joachimiak, W.F.Anderson, Midwest Center For Structural Genomics(Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.55
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	109.913, 109.913, 182.412, 90.00, 90.00, 120.00
R / Rfree (%)	24.8 / 31.7

The structure of Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Chlorine atom in the Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase (pdb code 2o6i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase, PDB code: 2o6i:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl503 b:84.8 occ:0.66 O A:HOH508 3.0 60.4 1.0 OG1 A:THR51 3.4 72.6 1.0 N A:THR51 3.6 72.3 1.0 O A:TYR117 3.8 70.6 1.0 C A:TYR117 3.9 70.7 1.0 CA A:GLY50 3.9 71.2 1.0 OG1 A:THR120 3.9 72.1 1.0 CA A:TYR117 3.9 70.7 1.0 CB A:TYR117 4.1 70.6 1.0 N A:THR120 4.1 71.9 1.0 CB A:HIS119 4.2 72.2 1.0 C A:GLY50 4.2 71.6 1.0 N A:HIS119 4.3 71.6 1.0 CB A:THR51 4.3 72.8 1.0 CG2 A:THR51 4.4 73.0 1.0 N A:GLY50 4.5 70.5 1.0 CB A:THR120 4.5 71.9 1.0 N A:SER118 4.5 70.8 1.0 CA A:THR51 4.6 72.9 1.0 CA A:HIS119 4.6 71.9 1.0 CD2 A:TYR117 4.7 70.5 1.0 C A:HIS119 4.9 71.9 1.0 CG A:TYR117 4.9 70.3 1.0 CA A:THR120 4.9 72.0 1.0

Chlorine binding site 2 out of 2 in the Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of An Enterococcus Faecalis Hd Domain Phosphohydrolase within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl504 b:63.1 occ:0.50 CE1 B:HIS119 1.1 67.5 0.5 NE2 B:HIS119 1.4 67.4 0.5 ND1 B:HIS119 2.3 67.5 0.5 CD2 B:HIS119 2.6 67.3 0.5 CG B:HIS119 3.0 67.4 0.5 N B:THR51 3.2 74.7 1.0 OG1 B:THR51 3.3 75.3 1.0 OG1 B:THR120 3.4 68.4 1.0 CB B:TYR117 3.6 65.8 1.0 CA B:GLY50 3.7 73.8 1.0 O B:HOH605 3.8 75.1 1.0 CA B:TYR117 3.8 66.2 1.0 CD2 B:TYR117 4.0 64.5 1.0 C B:GLY50 4.0 74.3 1.0 CG2 B:THR51 4.0 75.2 1.0 CB B:THR51 4.0 75.1 1.0 O B:TYR117 4.1 66.4 1.0 C B:TYR117 4.1 66.3 1.0 CA B:THR51 4.2 75.2 1.0 CG B:TYR117 4.3 65.2 1.0 CB B:THR120 4.3 68.1 1.0 N B:THR120 4.4 67.5 1.0 CB B:HIS119 4.4 67.2 0.5 N B:GLY50 4.6 73.3 1.0 CB B:HIS119 4.7 67.0 0.5 N B:HIS119 4.8 67.1 0.5 N B:HIS119 4.8 67.0 0.5 O B:LEU49 4.9 73.0 1.0 CD2 B:LEU255 5.0 61.0 1.0

I.I.Vorontsov, G.Minasov, O.Kiryukhina, J.S.Brunzelle, L.Shuvalova, W.F.Anderson. Characterization of the Deoxynucleotide Triphosphate Triphosphohydrolase (Dntpase) Activity of the EF1143 Protein From Enterococcus Faecalis and Crystal Structure of the Activator-Substrate Complex. J.Biol.Chem. V. 286 33158 2011.
ISSN: ISSN 0021-9258
PubMed: 21757692
DOI: 10.1074/JBC.M111.250456