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Chlorine in PDB 2oe7: High-Pressure T4 Lysozyme

Enzymatic activity of High-Pressure T4 Lysozyme

All present enzymatic activity of High-Pressure T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of High-Pressure T4 Lysozyme, PDB code: 2oe7 was solved by M.D.Collins, M.L.Quillin, B.W.Matthews, S.M.Gruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.56 / 2.10
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.715, 60.715, 96.009, 90.00, 90.00, 120.00
R / Rfree (%) 15.7 / 21.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Pressure T4 Lysozyme (pdb code 2oe7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the High-Pressure T4 Lysozyme, PDB code: 2oe7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2oe7

Go back to Chlorine Binding Sites List in 2oe7
Chlorine binding site 1 out of 2 in the High-Pressure T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Pressure T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl173

b:41.6
occ:1.00
O X:HOH933 2.8 28.0 1.0
O X:HOH1018 2.8 17.8 1.0
N X:ARG145 3.0 12.7 1.0
N X:ASN144 3.4 13.5 1.0
C X:THR142 3.5 14.1 1.0
CB X:ARG145 3.6 13.4 1.0
CB X:THR142 3.6 15.2 1.0
CA X:THR142 3.6 14.1 1.0
O X:THR142 3.6 14.0 1.0
CB X:ASN144 3.8 15.4 1.0
CA X:ASN144 3.9 15.0 1.0
CA X:ARG145 3.9 13.5 1.0
C X:ASN144 3.9 14.0 1.0
N X:PRO143 4.0 14.6 1.0
O X:HOH1020 4.2 49.1 1.0
CG2 X:THR142 4.3 13.8 1.0
C X:PRO143 4.3 14.1 1.0
O X:HOH954 4.4 32.8 1.0
CD X:PRO143 4.6 14.2 1.0
OG1 X:THR142 4.7 15.0 1.0
CA X:PRO143 4.8 14.3 1.0
O X:HOH961 4.8 28.7 1.0
CG X:ASN144 4.9 21.0 1.0
N X:ALA146 5.0 12.7 1.0

Chlorine binding site 2 out of 2 in 2oe7

Go back to Chlorine Binding Sites List in 2oe7
Chlorine binding site 2 out of 2 in the High-Pressure T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High-Pressure T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl178

b:36.3
occ:0.50
O X:HOH939 2.9 21.0 1.0
O X:HOH911 3.2 26.0 1.0
O X:HOH925 3.3 30.8 1.0
CE1 X:HIS31 3.9 15.7 1.0
CB X:ALA49 3.9 16.1 1.0
NE2 X:HIS31 4.0 13.8 1.0
CA X:ALA49 4.3 16.9 1.0
NE2 X:GLN69 4.4 15.0 1.0
O X:HOH992 4.4 35.5 1.0
O X:HOH968 4.4 36.5 1.0
CD2 X:LEU66 4.4 18.3 1.0
O X:ALA49 4.9 17.3 1.0

Reference:

M.D.Collins, M.L.Quillin, G.Hummer, B.W.Matthews, S.M.Gruner. Structural Rigidity of A Large Cavity-Containing Protein Revealed By High-Pressure Crystallography. J.Mol.Biol. V. 367 752 2007.
ISSN: ISSN 0022-2836
PubMed: 17292912
DOI: 10.1016/J.JMB.2006.12.021
Page generated: Sat Dec 12 09:13:09 2020

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