Atomistry » Chlorine » PDB 2o9s-2ol0 » 2oea
Atomistry »
  Chlorine »
    PDB 2o9s-2ol0 »
      2oea »

Chlorine in PDB 2oea: High-Pressure Structure of Pseudo-Wt T4 Lysozyme

Enzymatic activity of High-Pressure Structure of Pseudo-Wt T4 Lysozyme

All present enzymatic activity of High-Pressure Structure of Pseudo-Wt T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of High-Pressure Structure of Pseudo-Wt T4 Lysozyme, PDB code: 2oea was solved by M.D.Collins, M.L.Quillin, B.W.Matthews, S.M.Gruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.41 / 2.01
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.548, 60.548, 95.525, 90.00, 90.00, 120.00
R / Rfree (%) 15.9 / 21.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme (pdb code 2oea). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme, PDB code: 2oea:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2oea

Go back to Chlorine Binding Sites List in 2oea
Chlorine binding site 1 out of 2 in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High-Pressure Structure of Pseudo-Wt T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl173

b:38.7
occ:1.00
O X:HOH999 2.7 15.8 1.0
O X:HOH935 2.8 31.1 1.0
N X:ARG145 3.0 11.0 1.0
N X:ASN144 3.4 11.8 1.0
C X:THR142 3.5 10.2 1.0
CB X:THR142 3.5 11.2 1.0
CB X:ARG145 3.5 11.2 1.0
CA X:THR142 3.5 10.8 1.0
O X:THR142 3.6 10.2 1.0
CB X:ASN144 3.8 13.6 1.0
CA X:ASN144 3.8 12.8 1.0
CA X:ARG145 3.9 11.4 1.0
C X:ASN144 3.9 12.0 1.0
N X:PRO143 4.0 10.7 1.0
O X:HOH1029 4.0 42.9 1.0
C X:PRO143 4.3 11.6 1.0
CG2 X:THR142 4.3 11.3 1.0
O X:HOH954 4.5 24.5 1.0
CD X:PRO143 4.6 9.7 1.0
OG1 X:THR142 4.6 11.2 1.0
CA X:PRO143 4.7 10.7 1.0
CG X:ASN144 4.8 18.6 1.0
O X:HOH961 4.9 25.3 1.0
CG X:ARG145 4.9 14.2 1.0
N X:ALA146 5.0 11.8 1.0
N X:THR142 5.0 10.4 1.0

Chlorine binding site 2 out of 2 in 2oea

Go back to Chlorine Binding Sites List in 2oea
Chlorine binding site 2 out of 2 in the High-Pressure Structure of Pseudo-Wt T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of High-Pressure Structure of Pseudo-Wt T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl178

b:40.4
occ:0.50
O X:HOH941 2.9 14.4 1.0
O X:HOH928 3.2 26.9 1.0
O X:HOH912 3.3 25.8 1.0
CE1 X:HIS31 3.8 14.4 1.0
CB X:ALA49 3.9 15.2 1.0
NE2 X:HIS31 4.0 11.3 1.0
O X:HOH968 4.1 48.9 1.0
CA X:ALA49 4.3 15.7 1.0
O X:HOH994 4.4 32.1 1.0
NE2 X:GLN69 4.4 14.4 1.0
CD2 X:LEU66 4.5 14.2 1.0
O X:ALA49 4.8 16.6 1.0

Reference:

M.D.Collins, M.L.Quillin, G.Hummer, B.W.Matthews, S.M.Gruner. Structural Rigidity of A Large Cavity-Containing Protein Revealed By High-Pressure Crystallography. J.Mol.Biol. V. 367 752 2007.
ISSN: ISSN 0022-2836
PubMed: 17292912
DOI: 10.1016/J.JMB.2006.12.021
Page generated: Sat Jul 20 09:30:51 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy