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Chlorine in PDB 2og6: Crystal Structure of Asparagine Oxygenase in Complex with Fe(II)

Protein crystallography data

The structure of Crystal Structure of Asparagine Oxygenase in Complex with Fe(II), PDB code: 2og6 was solved by L.-O.Essen, M.Strieker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.92
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 90.733, 90.733, 89.791, 90.00, 90.00, 120.00
R / Rfree (%) 16.9 / 19.7

Other elements in 2og6:

The structure of Crystal Structure of Asparagine Oxygenase in Complex with Fe(II) also contains other interesting chemical elements:

Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Asparagine Oxygenase in Complex with Fe(II) (pdb code 2og6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Asparagine Oxygenase in Complex with Fe(II), PDB code: 2og6:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2og6

Go back to Chlorine Binding Sites List in 2og6
Chlorine binding site 1 out of 2 in the Crystal Structure of Asparagine Oxygenase in Complex with Fe(II)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Asparagine Oxygenase in Complex with Fe(II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl7001

b:67.4
occ:1.00
N A:LEU272 3.2 42.7 1.0
NH2 A:ARG301 3.3 45.8 1.0
O A:HOH9037 3.3 46.0 1.0
NE A:ARG301 3.4 44.2 1.0
O A:HIS270 3.5 44.6 1.0
N A:LEU183 3.8 39.2 1.0
CA A:ARG271 3.8 43.9 1.0
CZ A:ARG301 3.8 44.9 1.0
CB A:LEU272 4.0 42.9 1.0
C A:ARG271 4.0 43.3 1.0
CA A:GLY182 4.0 39.1 1.0
CA A:LEU272 4.1 42.5 1.0
CG A:LEU272 4.2 44.2 1.0
C A:GLY182 4.3 39.3 1.0
O A:ALA181 4.3 38.7 1.0
C A:HIS270 4.4 44.4 1.0
N A:GLY182 4.5 39.1 1.0
CB A:LEU183 4.6 38.8 1.0
C A:ALA181 4.6 38.5 1.0
CD A:ARG301 4.6 41.9 1.0
O A:LEU272 4.6 41.2 1.0
N A:ARG271 4.7 44.1 1.0
CG A:ARG271 4.7 44.6 1.0
CD1 A:LEU272 4.7 45.9 1.0
CA A:LEU183 4.7 39.0 1.0
CB A:ARG271 4.8 44.3 1.0
C A:LEU272 4.9 41.7 1.0
CD2 A:LEU303 5.0 39.3 1.0

Chlorine binding site 2 out of 2 in 2og6

Go back to Chlorine Binding Sites List in 2og6
Chlorine binding site 2 out of 2 in the Crystal Structure of Asparagine Oxygenase in Complex with Fe(II)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Asparagine Oxygenase in Complex with Fe(II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl9001

b:74.0
occ:0.50
CZ A:ARG67 4.0 38.3 1.0
NE A:ARG67 4.0 38.3 1.0
O A:HOH9077 4.1 53.6 1.0
NH2 A:ARG67 4.1 39.7 1.0
O A:HOH9076 4.2 43.8 1.0
NH1 A:ARG67 4.3 37.2 1.0
CD A:ARG67 4.6 38.7 1.0
O A:GLY115 5.0 38.3 1.0

Reference:

M.Strieker, F.Kopp, C.Mahlert, L.-O.Essen, M.A.Marahiel. Mechanistic and Structural Basis of Stereospecific Cbeta-Hydroxylation in Calcium-Dependent Antibiotic, A Daptomycin-Type Lipopeptide Acs Chem.Biol. V. 2 187 2007.
ISSN: ISSN 1554-8929
PubMed: 17373765
DOI: 10.1021/CB700012Y
Page generated: Sat Dec 12 09:13:11 2020

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