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Chlorine in PDB 2ogi: Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution, PDB code: 2ogi was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.55 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 65.841, 52.535, 70.022, 90.00, 114.29, 90.00
R / Rfree (%) 17.2 / 22.9

Other elements in 2ogi:

The structure of Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution (pdb code 2ogi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution, PDB code: 2ogi:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 2ogi

Go back to Chlorine Binding Sites List in 2ogi
Chlorine binding site 1 out of 3 in the Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:58.2
occ:1.00
N A:GLY145 3.0 36.1 1.0
N A:GLU147 3.4 35.0 1.0
CA A:GLY145 3.4 37.9 1.0
N A:VAL146 3.5 39.0 1.0
C A:GLY145 3.5 38.9 1.0
CB A:GLU147 3.9 36.3 1.0
O A:PHE143 4.0 38.8 1.0
C A:PRO144 4.1 36.5 1.0
CA A:GLU147 4.2 33.1 1.0
N A:GLU148 4.2 33.5 1.0
O A:GLY145 4.2 38.5 1.0
C A:VAL146 4.4 35.1 1.0
CA A:PRO144 4.4 35.5 1.0
CA A:VAL146 4.4 36.8 1.0
CG1 A:VAL146 4.6 42.6 1.0
C A:GLU147 4.7 32.1 1.0
O A:HOH450 4.7 42.4 1.0
O A:HOH417 4.9 32.1 1.0
C A:PHE143 5.0 37.9 1.0
O A:HOH468 5.0 45.2 1.0

Chlorine binding site 2 out of 3 in 2ogi

Go back to Chlorine Binding Sites List in 2ogi
Chlorine binding site 2 out of 3 in the Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:62.7
occ:1.00
CB A:LYS48 3.9 33.2 1.0
CD1 A:ILE38 4.3 27.9 1.0
C A:LYS48 4.3 27.5 1.0
O A:LYS48 4.4 25.4 1.0
CG A:GLU49 4.4 40.0 1.0
CG2 A:ILE38 4.5 28.8 1.0
N A:GLU49 4.5 28.2 1.0
CE A:LYS48 4.6 46.5 1.0
CG1 A:ILE38 4.6 27.0 1.0
CA A:GLU49 4.7 31.4 1.0
CA A:LYS48 4.8 30.6 1.0
CG A:LYS48 5.0 36.3 1.0

Chlorine binding site 3 out of 3 in 2ogi

Go back to Chlorine Binding Sites List in 2ogi
Chlorine binding site 3 out of 3 in the Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Metal Dependent Phosphohydrolase (SAG1661) From Streptococcus Agalactiae Serogroup V at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:50.4
occ:1.00
O A:HOH445 3.1 40.1 1.0
CE1 A:HIS139 3.3 34.7 1.0
NE A:ARG35 3.4 39.2 1.0
O A:HOH403 3.7 39.7 1.0
O A:LEU31 3.7 24.4 1.0
C A:LEU31 3.8 26.2 1.0
N A:GLY32 3.8 24.1 1.0
CA A:GLY32 3.9 24.0 1.0
CB A:LEU31 4.0 23.7 1.0
NE2 A:HIS139 4.2 30.0 1.0
CD A:ARG35 4.2 31.5 1.0
ND1 A:HIS139 4.2 35.9 1.0
O A:HOH421 4.2 33.9 1.0
CB A:ARG35 4.3 29.1 1.0
CA A:LEU31 4.5 25.7 1.0
CG A:ARG35 4.8 29.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Thu Jul 10 23:30:05 2025

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