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Chlorine in PDB 2okd: High Resolution Crystal Structures of Vaccinia Virus Dutpase

Enzymatic activity of High Resolution Crystal Structures of Vaccinia Virus Dutpase

All present enzymatic activity of High Resolution Crystal Structures of Vaccinia Virus Dutpase:
3.6.1.23;

Protein crystallography data

The structure of High Resolution Crystal Structures of Vaccinia Virus Dutpase, PDB code: 2okd was solved by N.Schormann, D.Chattopadhyay, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.64 / 2.40
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 120.010, 120.010, 50.300, 90.00, 90.00, 120.00
R / Rfree (%) 20.6 / 26.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the High Resolution Crystal Structures of Vaccinia Virus Dutpase (pdb code 2okd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the High Resolution Crystal Structures of Vaccinia Virus Dutpase, PDB code: 2okd:

Chlorine binding site 1 out of 1 in 2okd

Go back to Chlorine Binding Sites List in 2okd
Chlorine binding site 1 out of 1 in the High Resolution Crystal Structures of Vaccinia Virus Dutpase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of High Resolution Crystal Structures of Vaccinia Virus Dutpase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl200

b:30.3
occ:1.00
NE2 C:GLN118 3.2 31.4 1.0
NE2 A:GLN118 3.2 29.3 1.0
NE2 B:GLN118 3.3 32.3 1.0
OH A:TYR63 3.5 30.8 1.0
OE1 C:GLN118 3.5 32.1 1.0
NE A:ARG65 3.6 31.9 1.0
NE B:ARG65 3.6 31.0 1.0
OE1 A:GLN118 3.6 29.7 1.0
CD A:ARG65 3.7 31.6 1.0
CD C:GLN118 3.7 31.0 1.0
NE C:ARG65 3.8 28.9 1.0
OE1 B:GLN118 3.8 32.6 1.0
OH B:TYR63 3.9 27.0 1.0
CD A:GLN118 3.9 29.1 1.0
OH C:TYR63 3.9 27.2 1.0
CD B:GLN118 4.0 31.1 1.0
CZ C:ARG65 4.1 29.3 1.0
NH2 C:ARG65 4.1 29.2 1.0
CZ A:ARG65 4.1 31.3 1.0
CZ B:ARG65 4.2 30.8 1.0
NH2 B:ARG65 4.2 28.6 1.0
CG B:ARG65 4.3 30.7 1.0
CD B:ARG65 4.3 31.3 1.0
CG C:ARG65 4.4 28.7 1.0
CD C:ARG65 4.5 28.9 1.0
NH2 A:ARG65 4.5 31.2 1.0
NH1 A:ARG65 4.7 30.2 1.0
CZ A:TYR63 4.8 30.7 1.0
NH1 C:ARG65 4.9 28.3 1.0

Reference:

A.Samal, N.Schormann, W.J.Cook, L.J.Delucas, D.Chattopadhyay. Structures of Vaccinia Virus Dutpase and Its Nucleotide Complexes. Acta Crystallogr.,Sect.D V. 63 571 2007.
ISSN: ISSN 0907-4449
PubMed: 17452782
DOI: 10.1107/S0907444907007871
Page generated: Sat Dec 12 09:13:24 2020

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