Chlorine in PDB 2oos: Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
Enzymatic activity of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
All present enzymatic activity of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase:
1.3.1.9;
Protein crystallography data
The structure of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase, PDB code: 2oos
was solved by
H.Tsai,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
92.85 /
2.10
|
Space group
|
P 43 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
131.221,
131.221,
83.163,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.2 /
22.7
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
(pdb code 2oos). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase, PDB code: 2oos:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 2oos
Go back to
Chlorine Binding Sites List in 2oos
Chlorine binding site 1 out
of 4 in the Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl500
b:39.1
occ:1.00
|
CL20
|
A:JPJ500
|
0.0
|
39.1
|
1.0
|
C15
|
A:JPJ500
|
1.8
|
36.9
|
1.0
|
C16
|
A:JPJ500
|
2.7
|
39.7
|
1.0
|
C14
|
A:JPJ500
|
2.8
|
36.5
|
1.0
|
O13
|
A:JPJ500
|
3.0
|
34.7
|
1.0
|
CB
|
A:ALA319
|
3.1
|
42.5
|
1.0
|
O5D
|
A:NAD450
|
3.4
|
35.0
|
1.0
|
C5B
|
A:NAD450
|
3.6
|
43.3
|
1.0
|
CB
|
A:ALA217
|
3.6
|
30.7
|
1.0
|
C2D
|
A:NAD450
|
3.7
|
31.8
|
1.0
|
C3D
|
A:NAD450
|
3.7
|
32.7
|
1.0
|
O
|
A:ALA217
|
3.8
|
30.9
|
1.0
|
O3
|
A:NAD450
|
3.9
|
37.5
|
1.0
|
O
|
A:HOH600
|
3.9
|
49.6
|
1.0
|
C17
|
A:JPJ500
|
4.0
|
37.6
|
1.0
|
N
|
A:ALA217
|
4.1
|
31.4
|
1.0
|
O2D
|
A:NAD450
|
4.1
|
32.3
|
1.0
|
C19
|
A:JPJ500
|
4.1
|
36.1
|
1.0
|
CA
|
A:ALA217
|
4.2
|
31.3
|
1.0
|
PN
|
A:NAD450
|
4.3
|
35.2
|
1.0
|
C
|
A:ALA217
|
4.3
|
31.6
|
1.0
|
C5D
|
A:NAD450
|
4.3
|
33.7
|
1.0
|
C2
|
A:JPJ500
|
4.3
|
35.5
|
1.0
|
O5B
|
A:NAD450
|
4.4
|
42.1
|
1.0
|
O2N
|
A:NAD450
|
4.4
|
37.7
|
1.0
|
C22
|
A:JPJ500
|
4.6
|
38.1
|
1.0
|
C4D
|
A:NAD450
|
4.6
|
32.9
|
1.0
|
CA
|
A:ALA319
|
4.6
|
42.5
|
1.0
|
PA
|
A:NAD450
|
4.7
|
39.9
|
1.0
|
O1A
|
A:NAD450
|
4.7
|
40.4
|
1.0
|
O3D
|
A:NAD450
|
4.8
|
30.7
|
1.0
|
C
|
A:LEU216
|
4.9
|
31.7
|
1.0
|
C4B
|
A:NAD450
|
4.9
|
40.5
|
1.0
|
O4B
|
A:NAD450
|
4.9
|
39.8
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 2oos
Go back to
Chlorine Binding Sites List in 2oos
Chlorine binding site 2 out
of 4 in the Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl500
b:39.0
occ:1.00
|
CL21
|
A:JPJ500
|
0.0
|
39.0
|
1.0
|
C17
|
A:JPJ500
|
1.8
|
37.6
|
1.0
|
C16
|
A:JPJ500
|
2.7
|
39.7
|
1.0
|
C22
|
A:JPJ500
|
2.8
|
38.1
|
1.0
|
N
|
A:ALA219
|
3.5
|
33.8
|
1.0
|
CB
|
A:VAL222
|
3.8
|
35.8
|
1.0
|
CA
|
A:ASN218
|
3.8
|
32.4
|
1.0
|
CB
|
A:ALA219
|
3.9
|
32.0
|
1.0
|
O
|
A:ALA219
|
3.9
|
33.4
|
1.0
|
C
|
A:ASN218
|
3.9
|
33.2
|
1.0
|
ND2
|
A:ASN218
|
4.0
|
29.7
|
1.0
|
C15
|
A:JPJ500
|
4.0
|
36.9
|
1.0
|
CG1
|
A:VAL222
|
4.0
|
35.6
|
1.0
|
CG2
|
A:VAL222
|
4.0
|
33.5
|
1.0
|
C19
|
A:JPJ500
|
4.1
|
36.1
|
1.0
|
CA
|
A:ALA219
|
4.2
|
33.9
|
1.0
|
CG
|
A:MET281
|
4.2
|
28.8
|
1.0
|
SD
|
A:MET281
|
4.3
|
34.1
|
1.0
|
C
|
A:ALA219
|
4.5
|
34.8
|
1.0
|
C14
|
A:JPJ500
|
4.5
|
36.5
|
1.0
|
N
|
A:ASN218
|
4.5
|
32.0
|
1.0
|
O
|
A:ASN218
|
4.8
|
33.7
|
1.0
|
C
|
A:ALA217
|
4.9
|
31.6
|
1.0
|
O
|
A:ALA217
|
4.9
|
30.9
|
1.0
|
CG
|
A:ASN218
|
4.9
|
34.0
|
1.0
|
CB
|
A:ASN218
|
5.0
|
33.3
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 2oos
Go back to
Chlorine Binding Sites List in 2oos
Chlorine binding site 3 out
of 4 in the Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl500
b:37.3
occ:1.00
|
CL20
|
B:JPJ500
|
0.0
|
37.3
|
1.0
|
C15
|
B:JPJ500
|
1.8
|
35.3
|
1.0
|
C14
|
B:JPJ500
|
2.7
|
34.0
|
1.0
|
C16
|
B:JPJ500
|
2.7
|
35.3
|
1.0
|
O13
|
B:JPJ500
|
2.9
|
33.4
|
1.0
|
CB
|
B:ALA319
|
3.2
|
39.3
|
1.0
|
O5D
|
B:NAD450
|
3.5
|
35.3
|
1.0
|
O3
|
B:NAD450
|
3.7
|
40.7
|
1.0
|
CB
|
B:ALA217
|
3.8
|
30.0
|
1.0
|
C2D
|
B:NAD450
|
3.8
|
33.0
|
1.0
|
C5B
|
B:NAD450
|
3.9
|
42.9
|
1.0
|
O
|
B:ALA217
|
3.9
|
32.8
|
1.0
|
C3D
|
B:NAD450
|
3.9
|
32.9
|
1.0
|
C17
|
B:JPJ500
|
4.0
|
35.7
|
1.0
|
C19
|
B:JPJ500
|
4.0
|
34.8
|
1.0
|
O
|
B:HOH588
|
4.1
|
39.5
|
1.0
|
O2D
|
B:NAD450
|
4.1
|
32.4
|
1.0
|
C2
|
B:JPJ500
|
4.2
|
31.7
|
1.0
|
PN
|
B:NAD450
|
4.2
|
35.6
|
1.0
|
N
|
B:ALA217
|
4.3
|
31.9
|
1.0
|
C5D
|
B:NAD450
|
4.3
|
33.9
|
1.0
|
C
|
B:ALA217
|
4.4
|
32.2
|
1.0
|
O2N
|
B:NAD450
|
4.4
|
37.2
|
1.0
|
CA
|
B:ALA217
|
4.4
|
31.7
|
1.0
|
C22
|
B:JPJ500
|
4.5
|
36.4
|
1.0
|
O5B
|
B:NAD450
|
4.6
|
44.3
|
1.0
|
O1A
|
B:NAD450
|
4.6
|
39.9
|
1.0
|
CA
|
B:ALA319
|
4.7
|
40.2
|
1.0
|
PA
|
B:NAD450
|
4.7
|
39.1
|
1.0
|
C4D
|
B:NAD450
|
4.7
|
30.7
|
1.0
|
C3
|
B:JPJ500
|
4.9
|
32.7
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 2oos
Go back to
Chlorine Binding Sites List in 2oos
Chlorine binding site 4 out
of 4 in the Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Plasmodium Falciparum Enoyl Acp Reductase with Triclosan Reductase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl500
b:37.6
occ:1.00
|
CL21
|
B:JPJ500
|
0.0
|
37.6
|
1.0
|
C17
|
B:JPJ500
|
1.8
|
35.7
|
1.0
|
C16
|
B:JPJ500
|
2.7
|
35.3
|
1.0
|
C22
|
B:JPJ500
|
2.7
|
36.4
|
1.0
|
N
|
B:ALA219
|
3.4
|
34.8
|
1.0
|
O
|
B:HOH670
|
3.4
|
48.8
|
1.0
|
C
|
B:ASN218
|
3.8
|
34.2
|
1.0
|
CA
|
B:ASN218
|
3.8
|
34.3
|
1.0
|
CB
|
B:ALA219
|
3.8
|
34.0
|
1.0
|
CB
|
B:VAL222
|
3.9
|
34.6
|
1.0
|
C15
|
B:JPJ500
|
4.0
|
35.3
|
1.0
|
C19
|
B:JPJ500
|
4.0
|
34.8
|
1.0
|
CG2
|
B:VAL222
|
4.0
|
31.5
|
1.0
|
O
|
B:ALA219
|
4.0
|
34.6
|
1.0
|
CG1
|
B:VAL222
|
4.1
|
34.4
|
1.0
|
CA
|
B:ALA219
|
4.1
|
34.9
|
1.0
|
CG
|
B:MET281
|
4.2
|
31.2
|
1.0
|
SD
|
B:MET281
|
4.3
|
32.8
|
1.0
|
N
|
B:ASN218
|
4.3
|
33.3
|
1.0
|
C14
|
B:JPJ500
|
4.5
|
34.0
|
1.0
|
C
|
B:ALA219
|
4.5
|
35.0
|
1.0
|
O
|
B:ASN218
|
4.6
|
32.1
|
1.0
|
C
|
B:ALA217
|
4.8
|
32.2
|
1.0
|
O
|
B:ALA217
|
4.8
|
32.8
|
1.0
|
|
Reference:
J.S.Freundlich,
F.Wang,
H.-C.Tsai,
M.Kuo,
H.-M.Shieh,
J.W.Anderson,
L.J.Nkrumah,
J.-C.Valderramos,
M.Yu,
T.R.S.Kumar,
S.G.Valderramos,
W.R.Jacobs,
G.A.Schiehser,
D.P.Jacobus,
D.A.Fidock,
J.C.Sacchettini.
X-Ray Structural Analysis of Plasmodium Falciparum Enoyl Acyl Carrier Protein Reductase As A Pathway Toward the Optimization of Triclosan Antimalarial Efficacy J.Biol.Chem. V. 282 25436 2007.
ISSN: ISSN 0021-9258
PubMed: 17567585
DOI: 10.1074/JBC.M701813200
Page generated: Sat Jul 20 09:41:04 2024
|