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Chlorine in PDB 2ose: Crystal Structure of the Mimivirus Cyclophilin

Enzymatic activity of Crystal Structure of the Mimivirus Cyclophilin

All present enzymatic activity of Crystal Structure of the Mimivirus Cyclophilin:
5.2.1.8;

Protein crystallography data

The structure of Crystal Structure of the Mimivirus Cyclophilin, PDB code: 2ose was solved by E.Z.Eisenmesser, V.Thai, P.Renesto, D.Raoult, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.27 / 2.04
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 95.032, 95.032, 95.032, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Mimivirus Cyclophilin (pdb code 2ose). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Mimivirus Cyclophilin, PDB code: 2ose:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2ose

Go back to Chlorine Binding Sites List in 2ose
Chlorine binding site 1 out of 2 in the Crystal Structure of the Mimivirus Cyclophilin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Mimivirus Cyclophilin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:23.1
occ:1.00
OH A:TYR206 2.9 25.3 1.0
NH1 A:ARG30 3.3 26.3 1.0
CD A:ARG30 3.7 22.7 1.0
CZ A:TYR206 3.8 23.4 1.0
CE1 A:TYR206 3.8 23.1 1.0
CZ A:ARG30 4.3 23.4 1.0
NE2 A:GLN32 4.3 22.8 1.0
NE A:ARG30 4.4 23.6 1.0
CG A:TYR18 4.9 25.6 1.0
CB A:TYR18 4.9 24.8 1.0
CG A:ARG30 5.0 21.8 1.0

Chlorine binding site 2 out of 2 in 2ose

Go back to Chlorine Binding Sites List in 2ose
Chlorine binding site 2 out of 2 in the Crystal Structure of the Mimivirus Cyclophilin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Mimivirus Cyclophilin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:33.6
occ:1.00
NE2 A:GLN167 3.2 28.4 1.0
N A:ASP164 3.3 36.4 1.0
CB A:ASP164 3.8 36.6 1.0
CG A:GLN167 3.9 27.7 1.0
CA A:LEU163 4.0 36.3 1.0
CD A:GLN167 4.1 28.9 1.0
C A:LEU163 4.2 36.3 1.0
CA A:ASP164 4.2 37.2 1.0
CD2 A:LEU163 4.2 35.5 1.0
O A:GLU162 4.5 40.0 1.0
CB A:LEU163 4.7 35.9 1.0

Reference:

V.Thai, P.Renesto, C.A.Fowler, D.J.Brown, T.Davis, W.Gu, D.D.Pollock, D.Kern, D.Raoult, E.Z.Eisenmesser. Structural, Biochemical, and in Vivo Characterization of the First Virally Encoded Cyclophilin From the Mimivirus. J.Mol.Biol. V. 378 71 2008.
ISSN: ISSN 0022-2836
PubMed: 18342330
DOI: 10.1016/J.JMB.2007.08.051
Page generated: Sat Jul 20 09:43:15 2024

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