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Chlorine in PDB 2oxe: Structure of the Human Pancreatic Lipase-Related Protein 2

Enzymatic activity of Structure of the Human Pancreatic Lipase-Related Protein 2

All present enzymatic activity of Structure of the Human Pancreatic Lipase-Related Protein 2:
3.1.1.3;

Protein crystallography data

The structure of Structure of the Human Pancreatic Lipase-Related Protein 2, PDB code: 2oxe was solved by J.R.Walker, T.Davis, A.Seitova, P.J.Finerty Jr., C.Butler-Cole, I.Kozieradzki, J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.88 / 2.80
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 216.922, 216.922, 123.618, 90.00, 90.00, 90.00
R / Rfree (%) 22.2 / 26.1

Other elements in 2oxe:

The structure of Structure of the Human Pancreatic Lipase-Related Protein 2 also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Human Pancreatic Lipase-Related Protein 2 (pdb code 2oxe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Structure of the Human Pancreatic Lipase-Related Protein 2, PDB code: 2oxe:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 2oxe

Go back to Chlorine Binding Sites List in 2oxe
Chlorine binding site 1 out of 5 in the Structure of the Human Pancreatic Lipase-Related Protein 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Human Pancreatic Lipase-Related Protein 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1

b:59.3
occ:1.00
 ND2 A:ASN66 3.6 79.9 1.0
N A:ASN66 3.6 71.5 1.0
CD A:PRO64 3.7 79.8 1.0
N A:ASN65 3.9 73.4 1.0
ND2 A:ASN65 3.9 83.4 1.0
CB A:ASN65 4.0 75.9 1.0
CA A:ASN63 4.0 82.0 1.0
CB A:ASN66 4.1 72.9 1.0
N A:PRO64 4.2 75.1 1.0
CG A:ASN66 4.2 75.1 1.0
C A:ASN63 4.3 80.7 1.0
CA A:ASN65 4.3 72.5 1.0
CG A:ASN65 4.3 79.6 1.0
CA A:ASN66 4.4 70.1 1.0
CB A:ASN63 4.4 81.0 1.0
C A:ASN65 4.4 70.0 1.0
O A:ASN66 4.6 70.7 1.0
O A:GLU62 4.7 86.3 1.0
C A:PRO64 5.0 71.9 1.0
CG A:PRO64 5.0 81.5 1.0

Chlorine binding site 2 out of 5 in 2oxe

Go back to Chlorine Binding Sites List in 2oxe
Chlorine binding site 2 out of 5 in the Structure of the Human Pancreatic Lipase-Related Protein 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Human Pancreatic Lipase-Related Protein 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3

b:57.1
occ:1.00
 NZ A:LYS99 3.2 70.4 1.0
CE A:LYS99 4.2 67.0 1.0

Chlorine binding site 3 out of 5 in 2oxe

Go back to Chlorine Binding Sites List in 2oxe
Chlorine binding site 3 out of 5 in the Structure of the Human Pancreatic Lipase-Related Protein 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the Human Pancreatic Lipase-Related Protein 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2

b:77.5
occ:1.00
 N B:GLY255 3.5 60.5 1.0
CA B:PRO254 4.0 59.6 1.0
N B:CYS256 4.2 58.7 1.0
C B:PRO254 4.3 59.9 1.0
CA B:GLY255 4.3 60.8 1.0
C B:GLY255 4.5 60.2 1.0
C B:CYS256 4.5 58.3 1.0
O B:MET253 4.5 58.6 1.0
CB B:PRO254 4.7 60.2 1.0
CA B:CYS256 5.0 58.1 1.0

Chlorine binding site 4 out of 5 in 2oxe

Go back to Chlorine Binding Sites List in 2oxe
Chlorine binding site 4 out of 5 in the Structure of the Human Pancreatic Lipase-Related Protein 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of the Human Pancreatic Lipase-Related Protein 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl4

b:59.6
occ:1.00
 NZ B:LYS99 4.1 64.3 1.0
CE B:LYS99 4.3 64.3 1.0

Chlorine binding site 5 out of 5 in 2oxe

Go back to Chlorine Binding Sites List in 2oxe
Chlorine binding site 5 out of 5 in the Structure of the Human Pancreatic Lipase-Related Protein 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Structure of the Human Pancreatic Lipase-Related Protein 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl5

b:65.9
occ:1.00
 ND2 B:ASN66 3.4 0.2 1.0
CD B:PRO64 3.6 0.2 1.0
N B:ASN66 3.7 92.4 1.0
N B:ASN65 3.8 98.3 1.0
N B:PRO64 4.0 99.8 1.0
CA B:ASN63 4.0 0.3 1.0
CB B:ASN65 4.0 0.8 1.0
C B:ASN63 4.1 98.0 1.0
CG B:ASN66 4.1 99.9 1.0
CB B:ASN66 4.2 94.1 1.0
CA B:ASN65 4.3 97.6 1.0
C B:ASN65 4.4 91.7 1.0
CB B:ASN63 4.4 99.4 1.0
CA B:ASN66 4.5 88.9 1.0
CG B:PRO64 4.5 0.4 1.0
ND2 B:ASN65 4.6 0.6 1.0
CG B:ASN65 4.6 0.8 1.0
O B:ASN66 4.7 87.4 1.0
O B:GLU62 4.7 0.5 1.0
C B:PRO64 4.8 96.0 1.0
O B:ASN63 4.8 95.0 1.0
CA B:PRO64 5.0 98.4 1.0

Reference:

C.Eydoux, S.Spinelli, T.L.Davis, J.R.Walker, A.Seitova, S.Dhe-Paganon, A.De Caro, C.Cambillau, F.Carriere. Structure of Human Pancreatic Lipase-Related Protein 2 with the Lid in An Open Conformation. Biochemistry V. 47 9553 2008.
ISSN: ISSN 0006-2960
PubMed: 18702514
DOI: 10.1021/BI8005576
Page generated: Sat Jul 20 09:52:08 2024

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