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Chlorine in PDB 2p0n: NMB1532 Protein From Neisseria Meningitidis, Unknown Function

Protein crystallography data

The structure of NMB1532 Protein From Neisseria Meningitidis, Unknown Function, PDB code: 2p0n was solved by J.Osipiuk, H.Li, M.Bargassa, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.65 / 1.41
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.579, 59.558, 59.706, 90.00, 110.32, 90.00
R / Rfree (%) 16.8 / 20.3

Other elements in 2p0n:

The structure of NMB1532 Protein From Neisseria Meningitidis, Unknown Function also contains other interesting chemical elements:

Manganese (Mn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the NMB1532 Protein From Neisseria Meningitidis, Unknown Function (pdb code 2p0n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the NMB1532 Protein From Neisseria Meningitidis, Unknown Function, PDB code: 2p0n:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2p0n

Go back to Chlorine Binding Sites List in 2p0n
Chlorine binding site 1 out of 2 in the NMB1532 Protein From Neisseria Meningitidis, Unknown Function


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of NMB1532 Protein From Neisseria Meningitidis, Unknown Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl608

b:12.1
occ:1.00
MN A:MN604 2.4 11.5 1.0
MN A:MN605 2.5 10.5 1.0
OE1 A:GLU140 3.3 11.0 1.0
NE2 A:HIS136 3.4 8.9 1.0
NE2 A:HIS66 3.4 10.6 1.0
CD2 A:HIS136 3.4 9.3 1.0
CD2 A:HIS66 3.5 11.3 1.0
CE1 A:HIS67 3.5 18.2 1.0
OE1 A:GLU70 3.5 10.9 1.0
ND1 A:HIS67 3.6 16.8 1.0
OE2 A:GLU70 3.7 11.5 1.0
CD A:GLU70 4.0 10.2 1.0
OE2 A:GLU140 4.0 10.2 1.0
NE2 A:HIS96 4.0 10.6 1.0
NE2 A:HIS22 4.0 11.1 1.0
CD A:GLU140 4.1 9.5 1.0
CE1 A:TYR133 4.2 12.3 1.0
CD2 A:LEU137 4.3 14.8 1.0
CD1 A:LEU99 4.6 14.0 1.0
CD2 A:HIS96 4.6 11.8 1.0
CE1 A:HIS136 4.6 9.1 1.0
CE1 A:HIS66 4.7 11.9 1.0
CD2 A:HIS22 4.7 12.2 1.0
NE2 A:HIS67 4.7 18.9 1.0
CG A:HIS136 4.7 8.7 1.0
CG A:HIS66 4.8 11.3 1.0
CD1 A:TYR133 4.9 10.5 1.0
CG A:HIS67 4.9 15.3 1.0
CE1 A:HIS22 4.9 11.1 1.0
CE1 A:HIS96 4.9 10.6 1.0

Chlorine binding site 2 out of 2 in 2p0n

Go back to Chlorine Binding Sites List in 2p0n
Chlorine binding site 2 out of 2 in the NMB1532 Protein From Neisseria Meningitidis, Unknown Function


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of NMB1532 Protein From Neisseria Meningitidis, Unknown Function within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl609

b:12.5
occ:1.00
MN B:MN607 2.4 12.0 1.0
MN B:MN606 2.5 11.2 1.0
OE1 B:GLU140 3.3 11.6 1.0
NE2 B:HIS136 3.4 8.8 1.0
NE2 B:HIS66 3.4 10.8 1.0
CD2 B:HIS136 3.4 7.6 1.0
CD2 B:HIS66 3.5 11.0 1.0
OE1 B:GLU70 3.5 11.3 1.0
CD2 B:HIS67 3.5 14.1 1.0
NE2 B:HIS67 3.6 14.8 1.0
OE2 B:GLU70 3.7 11.3 1.0
OE2 B:GLU140 3.9 10.1 1.0
NE2 B:HIS96 3.9 11.2 1.0
CD B:GLU70 4.0 11.6 1.0
CD B:GLU140 4.0 11.2 1.0
NE2 B:HIS22 4.1 12.8 1.0
CE2 B:TYR133 4.2 13.0 1.0
CD2 B:LEU137 4.4 16.5 1.0
CD2 B:HIS96 4.5 12.2 1.0
CD1 B:LEU99 4.6 11.3 1.0
CE1 B:HIS136 4.7 9.1 1.0
CD2 B:HIS22 4.7 12.7 1.0
CE1 B:HIS66 4.7 12.9 1.0
CG B:HIS136 4.7 8.1 1.0
CG B:HIS66 4.8 10.2 1.0
CG B:HIS67 4.8 14.7 1.0
CD2 B:TYR133 4.9 9.9 1.0
CE1 B:HIS67 4.9 16.9 1.0
OH B:TYR133 4.9 14.6 1.0
CE1 B:HIS96 4.9 11.3 1.0
CE1 B:HIS22 5.0 11.2 1.0

Reference:

J.Osipiuk, H.Li, M.Bargassa, A.Joachimiak. X-Ray Crystal Structure of NMB1532 Protein of Unknown Function From Neisseria Meningitidis. To Be Published.
Page generated: Sat Dec 12 09:14:36 2020

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