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Chlorine in PDB 2p7h: Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution, PDB code: 2p7h was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.93 / 1.85
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 117.949, 117.949, 150.532, 90.00, 90.00, 90.00
R / Rfree (%) 14.9 / 18.3

Other elements in 2p7h:

The structure of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution (pdb code 2p7h). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution, PDB code: 2p7h:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 2p7h

Go back to Chlorine Binding Sites List in 2p7h
Chlorine binding site 1 out of 5 in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl250

b:61.8
occ:1.00
O A:HOH263 2.9 21.4 1.0
O A:HOH286 3.1 29.8 1.0
NH2 A:ARG183 3.1 24.1 1.0
SG A:CYS174 3.3 35.2 0.5
O A:HOH294 3.7 31.9 1.0
CB A:CYS174 4.1 19.3 0.5
CZ A:ARG183 4.2 23.5 1.0
CB A:THR180 4.3 18.5 1.0
CB A:CYS174 4.4 22.8 0.5
CE1 A:TYR176 4.4 19.8 1.0
SG A:CYS174 4.4 16.3 0.5
O A:HOH290 4.5 30.5 1.0
NH1 A:ARG183 4.5 21.8 1.0
CG2 A:THR180 4.5 19.8 1.0
O A:HOH260 4.5 20.1 1.0
O A:HOH258 4.7 19.2 1.0
OG1 A:THR180 4.7 20.5 1.0
CD1 A:TYR176 4.7 18.1 1.0
OD2 A:ASP184 5.0 20.2 1.0

Chlorine binding site 2 out of 5 in 2p7h

Go back to Chlorine Binding Sites List in 2p7h
Chlorine binding site 2 out of 5 in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl250

b:66.5
occ:1.00
O B:VAL163 3.8 17.1 1.0
OE1 B:GLU165 4.1 22.9 1.0
CD1 B:PHE168 4.2 22.9 1.0
CB B:PHE168 4.2 19.6 1.0
CG B:PHE168 4.2 19.8 1.0
O B:THR164 4.5 17.1 1.0
O B:HOH300 4.6 27.4 1.0
C B:THR164 4.7 17.5 1.0
N B:GLU165 4.8 17.4 1.0
CA B:GLU165 4.8 16.9 1.0
O B:HOH335 4.8 34.5 1.0
C B:VAL163 4.8 17.1 1.0
CE1 B:PHE168 4.9 25.8 1.0
O B:HOH285 4.9 24.9 1.0
CD B:GLU165 4.9 27.0 1.0
CD2 B:PHE168 5.0 20.1 1.0

Chlorine binding site 3 out of 5 in 2p7h

Go back to Chlorine Binding Sites List in 2p7h
Chlorine binding site 3 out of 5 in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl251

b:27.8
occ:0.50
O B:HOH268 3.0 20.8 1.0
N B:GLU132 3.1 22.7 1.0
CA B:ALA131 3.4 18.5 1.0
C B:ALA131 3.7 21.2 1.0
O B:HOH333 3.8 33.5 0.5
CB B:ALA131 3.9 20.7 1.0
CG B:GLU132 3.9 29.1 1.0
CB B:GLU132 4.2 26.3 1.0
CA B:GLU132 4.2 24.2 1.0
CD B:ARG102 4.3 22.1 1.0
CB B:ARG102 4.4 19.8 1.0
O B:LEU130 4.6 17.0 1.0
N B:ALA131 4.7 18.9 1.0
CG B:ARG102 4.9 20.8 1.0
O B:ALA131 4.9 16.2 1.0

Chlorine binding site 4 out of 5 in 2p7h

Go back to Chlorine Binding Sites List in 2p7h
Chlorine binding site 4 out of 5 in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl250

b:70.7
occ:1.00
NH2 C:ARG187 4.6 20.5 1.0

Chlorine binding site 5 out of 5 in 2p7h

Go back to Chlorine Binding Sites List in 2p7h
Chlorine binding site 5 out of 5 in the Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl250

b:24.2
occ:0.50
O D:HOH275 3.0 23.0 1.0
N D:GLU132 3.2 21.4 1.0
CA D:ALA131 3.5 20.1 1.0
C D:ALA131 3.8 21.3 1.0
O D:HOH341 3.9 43.7 0.5
CG D:GLU132 3.9 26.8 1.0
CB D:ALA131 4.0 22.1 1.0
CD D:ARG102 4.3 21.4 1.0
CB D:ARG102 4.3 20.0 1.0
CB D:GLU132 4.3 23.0 1.0
CA D:GLU132 4.3 22.6 1.0
O D:LEU130 4.6 17.8 1.0
N D:ALA131 4.7 20.9 1.0
CG D:ARG102 4.7 18.8 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Thu Jul 10 23:46:46 2025

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