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Chlorine in PDB 2pdg: Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A.

Enzymatic activity of Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A.

All present enzymatic activity of Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A.:
1.1.1.21;

Protein crystallography data

The structure of Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A., PDB code: 2pdg was solved by H.Steuber, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.42
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.287, 66.919, 47.104, 90.00, 92.72, 90.00
R / Rfree (%) 14.4 / 29.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A. (pdb code 2pdg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A., PDB code: 2pdg:

Chlorine binding site 1 out of 1 in 2pdg

Go back to Chlorine Binding Sites List in 2pdg
Chlorine binding site 1 out of 1 in the Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Aldose Reductase with Uracil-Type Inhibitor at 1.42A. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl600

b:18.1
occ:1.00
CL A:47D600 0.0 18.1 1.0
C14 A:47D600 1.7 14.8 1.0
C13 A:47D600 2.7 13.7 1.0
C15 A:47D600 2.7 14.0 1.0
CD1 A:TYR309 3.5 18.7 1.0
CG2 A:THR113 3.5 15.2 1.0
CD A:PRO310 3.7 15.2 1.0
OG1 A:THR113 3.7 14.0 1.0
CB A:CYS303 3.7 20.9 1.0
C1 A:47D600 3.9 12.8 1.0
CE3 A:TRP111 3.9 10.1 1.0
C12 A:47D600 4.0 13.6 1.0
CE1 A:TYR309 4.0 19.9 1.0
CB A:THR113 4.2 12.7 1.0
CA A:TYR309 4.3 18.4 1.0
CZ3 A:TRP111 4.4 13.6 1.0
C10 A:47D600 4.4 12.5 1.0
O A:CYS303 4.5 19.7 1.0
CG A:TYR309 4.5 15.9 1.0
SG A:CYS303 4.5 20.9 1.0
CG A:PRO310 4.6 14.7 1.0
CD2 A:TRP111 4.6 11.4 1.0
CB A:TYR309 4.7 16.2 1.0
N A:PRO310 4.8 17.3 1.0
CA A:CYS303 4.9 18.6 1.0
C A:CYS303 4.9 17.9 1.0
CB A:TRP111 5.0 12.2 1.0

Reference:

H.Steuber, A.Heine, A.Podjarny, G.Klebe. Merging the Binding Sites of Aldose and Aldehyde Reductase For Detection of Inhibitor Selectivity-Determining Features. J.Mol.Biol. V. 379 991 2008.
ISSN: ISSN 0022-2836
PubMed: 18495158
DOI: 10.1016/J.JMB.2008.03.063
Page generated: Sat Dec 12 09:15:08 2020

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