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Chlorine in PDB 2pfs: Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea

Protein crystallography data

The structure of Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea, PDB code: 2pfs was solved by M.Chruszcz, E.Evdokimova, M.Cymborowski, O.Kagan, A.Savchenko, A.Edwards, A.Joachimiak, W.Minor, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.25
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.000, 76.000, 42.987, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 25.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea (pdb code 2pfs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea, PDB code: 2pfs:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2pfs

Go back to Chlorine Binding Sites List in 2pfs
Chlorine binding site 1 out of 2 in the Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl149

b:81.5
occ:1.00
N A:VAL40 3.2 41.9 1.0
O A:VAL11 3.5 60.2 1.0
CA A:HIS39 3.9 39.5 1.0
CG2 A:VAL40 4.0 42.1 1.0
CB A:VAL40 4.0 42.0 1.0
C A:HIS39 4.0 40.0 1.0
CA A:VAL40 4.1 42.6 1.0
O A:VAL40 4.2 43.9 1.0
C A:VAL11 4.3 59.9 1.0
ND1 A:HIS39 4.3 33.0 1.0
CD1 A:ILE99 4.3 56.3 1.0
O A:ILE38 4.4 40.2 0.6
CB A:ALA10 4.5 54.7 1.0
C A:VAL40 4.6 44.2 1.0
O A:ILE38 4.7 40.6 0.4
N A:VAL11 4.7 57.2 1.0
CG A:HIS39 4.7 36.1 1.0
CB A:HIS39 4.8 39.4 1.0
N A:HIS39 4.8 39.8 1.0
CG1 A:ILE99 4.8 56.6 1.0
CB A:PRO95 4.9 57.1 1.0
CE1 A:HIS39 4.9 33.8 1.0
C A:ILE38 4.9 40.0 0.6
N A:ASP12 5.0 60.4 1.0
CA A:ASP12 5.0 60.9 1.0
C A:ALA10 5.0 56.0 1.0

Chlorine binding site 2 out of 2 in 2pfs

Go back to Chlorine Binding Sites List in 2pfs
Chlorine binding site 2 out of 2 in the Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Universal Stress Protein From Nitrosomonas Europaea within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl150

b:85.5
occ:1.00
N A:THR62 3.4 41.3 1.0
CB A:THR61 3.8 42.2 1.0
CA A:THR61 3.8 42.2 1.0
OG1 A:THR62 3.9 41.5 1.0
CZ A:TYR63 4.0 43.3 1.0
CE2 A:TYR63 4.1 43.0 1.0
C A:THR61 4.1 42.0 1.0
CG2 A:THR61 4.1 40.4 1.0
N A:TYR63 4.2 38.5 1.0
CE1 A:TYR63 4.2 45.0 1.0
CD2 A:TYR63 4.3 42.0 1.0
CA A:THR62 4.4 40.7 1.0
CD1 A:TYR63 4.4 44.3 1.0
CG A:TYR63 4.4 41.0 1.0
C A:THR62 4.4 39.7 1.0
OH A:TYR63 4.5 46.6 1.0
SE A:MSE66 4.7 67.7 1.0
CB A:THR62 4.8 41.4 1.0
CA A:TYR63 4.9 38.3 1.0

Reference:

K.L.Tkaczuk, I.A.Shumilin, M.Chruszcz, E.Evdokimova, A.Savchenko, W.Minor. Structural and Functional Insight Into the Universal Stress Protein Family. Evol Appl V. 6 434 2013.
ISSN: ESSN 1752-4571
PubMed: 23745136
DOI: 10.1111/EVA.12057
Page generated: Sat Jul 20 10:08:48 2024

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