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Chlorine in PDB 2px8: Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp

Enzymatic activity of Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp

All present enzymatic activity of Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp:
2.7.7.48;

Protein crystallography data

The structure of Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp, PDB code: 2px8 was solved by R.Assenberg, J.Ren, A.Verma, T.S.Walter, D.Alderton, R.J.Hurrelbrink, S.D.Fuller, R.J.Owens, D.I.Stuart, J.M.Grimes, Oxford Protein Productionfacility (Oppf), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.579, 87.445, 100.914, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp (pdb code 2px8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp, PDB code: 2px8:

Chlorine binding site 1 out of 1 in 2px8

Go back to Chlorine Binding Sites List in 2px8
Chlorine binding site 1 out of 1 in the Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase Domain in Complex with Sah and 7M-Gtp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:35.1
occ:1.00
 ND2 B:ASN17 3.2 24.9 1.0
O B:HOH537 3.5 21.0 1.0
CG B:GLU14 4.0 45.7 1.0
CA B:GLU14 4.0 33.9 1.0
CG B:ASN17 4.2 30.3 1.0
CB B:ASN17 4.2 24.6 1.0
O B:PRO152 4.3 28.1 1.0
CB B:GLU14 4.3 30.8 1.0
O B:GLU14 4.7 34.4 1.0
N B:GLU14 4.8 28.6 1.0
C B:GLU14 4.9 30.6 1.0
O B:LYS13 5.0 26.8 1.0

Reference:

R.Assenberg, J.Ren, A.Verma, T.S.Walter, D.Alderton, R.J.Hurrelbrink, S.D.Fuller, S.Bressanelli, R.J.Owens, D.I.Stuart, J.M.Grimes. Crystal Structure of the Murray Valley Encephalitis Virus NS5 Methyltransferase Domain in Complex with Cap Analogues. J.Gen.Virol. V. 88 2228 2007.
ISSN: ISSN 0022-1317
PubMed: 17622627
DOI: 10.1099/VIR.0.82757-0
Page generated: Sat Dec 12 09:15:54 2020

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