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Chlorine in PDB 2q6q: Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast

Protein crystallography data

The structure of Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast, PDB code: 2q6q was solved by V.N.Malashkevich, J.R.Newman, P.S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.36 / 1.97
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.860, 57.790, 57.170, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 29.7

Other elements in 2q6q:

The structure of Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast also contains other interesting chemical elements:

Cobalt (Co) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast (pdb code 2q6q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast, PDB code: 2q6q:

Chlorine binding site 1 out of 1 in 2q6q

Go back to Chlorine Binding Sites List in 2q6q
Chlorine binding site 1 out of 1 in the Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of SPC42P, A Critical Component of Spindle Pole Body in Budding Yeast within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl4

b:22.3
occ:1.00
ND2 A:ASN81 3.3 27.2 1.0
CD A:ARG77 3.8 46.4 1.0
CG A:ARG77 4.0 38.5 1.0
CG A:ASN81 4.3 28.8 1.0
OD1 A:ASN81 4.4 26.9 1.0
NE A:ARG77 4.8 41.5 1.0

Reference:

N.Zizlsperger, V.N.Malashkevich, S.Pillay, A.E.Keating. Analysis of Coiled-Coil Interactions Between Core Proteins of the Spindle Pole Body. Biochemistry V. 47 11858 2008.
ISSN: ISSN 0006-2960
PubMed: 18850724
DOI: 10.1021/BI801378Z
Page generated: Sat Dec 12 09:16:23 2020

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