Chlorine in PDB 2q7m: Crystal Structure of Human Flap with Mk-591
Protein crystallography data
The structure of Crystal Structure of Human Flap with Mk-591, PDB code: 2q7m
was solved by
A.D.Ferguson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
20.00 /
4.25
|
Space group
|
P 4 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
180.600,
180.600,
140.570,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
24.2 /
28.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Human Flap with Mk-591
(pdb code 2q7m). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Crystal Structure of Human Flap with Mk-591, PDB code: 2q7m:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 2q7m
Go back to
Chlorine Binding Sites List in 2q7m
Chlorine binding site 1 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl501
b:0.9
occ:1.00
|
CL17
|
C:2CS501
|
0.0
|
0.9
|
1.0
|
C16
|
C:2CS501
|
1.7
|
0.8
|
1.0
|
C15
|
C:2CS501
|
2.5
|
0.7
|
1.0
|
C13
|
C:2CS501
|
2.7
|
0.6
|
1.0
|
CB
|
C:PHE25
|
2.8
|
0.7
|
1.0
|
CA
|
C:PHE25
|
3.1
|
0.3
|
1.0
|
CG
|
C:PHE25
|
3.4
|
0.4
|
1.0
|
CD1
|
C:PHE25
|
3.6
|
0.8
|
1.0
|
N
|
C:PHE25
|
3.7
|
0.3
|
1.0
|
C14
|
C:2CS501
|
3.8
|
0.7
|
1.0
|
C12
|
C:2CS501
|
3.9
|
0.6
|
1.0
|
O
|
C:VAL21
|
4.2
|
0.7
|
1.0
|
C11
|
C:2CS501
|
4.3
|
0.7
|
1.0
|
CD2
|
C:PHE25
|
4.3
|
0.1
|
1.0
|
C
|
C:PHE25
|
4.4
|
0.0
|
1.0
|
C
|
C:GLY24
|
4.4
|
0.1
|
1.0
|
O
|
C:GLY24
|
4.6
|
0.8
|
1.0
|
CE1
|
C:PHE25
|
4.7
|
0.6
|
1.0
|
O
|
C:PHE25
|
4.9
|
0.2
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 2q7m
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Chlorine Binding Sites List in 2q7m
Chlorine binding site 2 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:1.0
occ:1.00
|
CL17
|
A:2CS502
|
0.0
|
1.0
|
1.0
|
C16
|
A:2CS502
|
1.7
|
0.8
|
1.0
|
C13
|
A:2CS502
|
2.6
|
0.8
|
1.0
|
C15
|
A:2CS502
|
2.6
|
0.7
|
1.0
|
C12
|
A:2CS502
|
3.9
|
0.7
|
1.0
|
C14
|
A:2CS502
|
3.9
|
0.7
|
1.0
|
CB
|
A:PHE25
|
4.2
|
0.7
|
1.0
|
C11
|
A:2CS502
|
4.3
|
0.7
|
1.0
|
CG
|
A:PHE25
|
4.6
|
0.5
|
1.0
|
CD1
|
A:PHE25
|
4.8
|
0.7
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 2q7m
Go back to
Chlorine Binding Sites List in 2q7m
Chlorine binding site 3 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl503
b:0.6
occ:1.00
|
CL17
|
A:2CS503
|
0.0
|
0.6
|
1.0
|
C16
|
A:2CS503
|
1.7
|
0.5
|
1.0
|
C13
|
A:2CS503
|
2.6
|
0.4
|
1.0
|
C15
|
A:2CS503
|
2.7
|
0.4
|
1.0
|
CB
|
B:PHE25
|
2.9
|
0.6
|
1.0
|
CA
|
B:PHE25
|
3.4
|
0.4
|
1.0
|
CG
|
B:PHE25
|
3.5
|
0.1
|
1.0
|
CD1
|
B:PHE25
|
3.8
|
0.4
|
1.0
|
C12
|
A:2CS503
|
3.9
|
0.4
|
1.0
|
N
|
B:PHE25
|
3.9
|
0.6
|
1.0
|
C14
|
A:2CS503
|
4.0
|
0.3
|
1.0
|
O
|
B:VAL21
|
4.2
|
0.7
|
1.0
|
C11
|
A:2CS503
|
4.4
|
0.3
|
1.0
|
CD2
|
B:PHE25
|
4.6
|
0.5
|
1.0
|
O5
|
A:2CS503
|
4.6
|
0.4
|
1.0
|
C
|
B:PHE25
|
4.7
|
0.6
|
1.0
|
C
|
B:GLY24
|
4.8
|
0.0
|
1.0
|
CE1
|
B:PHE25
|
4.9
|
0.5
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 2q7m
Go back to
Chlorine Binding Sites List in 2q7m
Chlorine binding site 4 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl504
b:0.0
occ:1.00
|
CL17
|
D:2CS504
|
0.0
|
0.0
|
1.0
|
C16
|
D:2CS504
|
1.7
|
0.9
|
1.0
|
C15
|
D:2CS504
|
2.6
|
0.9
|
1.0
|
C13
|
D:2CS504
|
2.6
|
0.8
|
1.0
|
CB
|
D:PHE25
|
3.6
|
0.5
|
1.0
|
C14
|
D:2CS504
|
3.9
|
0.8
|
1.0
|
C12
|
D:2CS504
|
3.9
|
0.8
|
1.0
|
CA
|
D:PHE25
|
4.1
|
0.2
|
1.0
|
O
|
D:VAL21
|
4.2
|
0.3
|
1.0
|
C11
|
D:2CS504
|
4.4
|
0.8
|
1.0
|
CG
|
D:PHE25
|
4.4
|
1.0
|
1.0
|
N
|
D:PHE25
|
4.5
|
0.2
|
1.0
|
CD1
|
D:PHE25
|
4.7
|
0.4
|
1.0
|
CG2
|
D:VAL21
|
4.9
|
1.0
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 2q7m
Go back to
Chlorine Binding Sites List in 2q7m
Chlorine binding site 5 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl505
b:0.7
occ:1.00
|
CL17
|
E:2CS505
|
0.0
|
0.7
|
1.0
|
C16
|
E:2CS505
|
1.7
|
0.6
|
1.0
|
C15
|
E:2CS505
|
2.6
|
0.5
|
1.0
|
C13
|
E:2CS505
|
2.7
|
0.4
|
1.0
|
CB
|
E:PHE25
|
2.8
|
0.3
|
1.0
|
CD1
|
E:PHE25
|
3.0
|
0.2
|
1.0
|
CG
|
E:PHE25
|
3.3
|
0.0
|
1.0
|
CA
|
E:PHE25
|
3.3
|
0.2
|
1.0
|
C14
|
E:2CS505
|
3.9
|
0.5
|
1.0
|
C12
|
E:2CS505
|
3.9
|
0.4
|
1.0
|
N
|
E:PHE25
|
4.0
|
0.3
|
1.0
|
O
|
E:VAL21
|
4.2
|
0.5
|
1.0
|
CE1
|
E:PHE25
|
4.2
|
0.7
|
1.0
|
C11
|
E:2CS505
|
4.4
|
0.4
|
1.0
|
CD2
|
E:PHE25
|
4.6
|
0.4
|
1.0
|
C
|
E:PHE25
|
4.6
|
0.5
|
1.0
|
C
|
E:GLY24
|
4.9
|
0.1
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 2q7m
Go back to
Chlorine Binding Sites List in 2q7m
Chlorine binding site 6 out
of 6 in the Crystal Structure of Human Flap with Mk-591
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Human Flap with Mk-591 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cl506
b:0.6
occ:1.00
|
CL17
|
E:2CS506
|
0.0
|
0.6
|
1.0
|
C16
|
E:2CS506
|
1.7
|
0.5
|
1.0
|
C15
|
E:2CS506
|
2.7
|
0.4
|
1.0
|
C13
|
E:2CS506
|
2.7
|
0.4
|
1.0
|
CB
|
F:PHE25
|
2.8
|
0.2
|
1.0
|
CG
|
F:PHE25
|
3.4
|
0.2
|
1.0
|
CA
|
F:PHE25
|
3.8
|
0.8
|
1.0
|
CD1
|
F:PHE25
|
3.9
|
0.2
|
1.0
|
C14
|
E:2CS506
|
4.0
|
0.4
|
1.0
|
C12
|
E:2CS506
|
4.0
|
0.4
|
1.0
|
CD2
|
F:PHE25
|
4.1
|
0.5
|
1.0
|
N
|
F:PHE25
|
4.5
|
1.0
|
1.0
|
C11
|
E:2CS506
|
4.5
|
0.4
|
1.0
|
O
|
F:VAL21
|
4.6
|
0.5
|
1.0
|
CE1
|
F:PHE25
|
4.9
|
0.4
|
1.0
|
|
Reference:
A.D.Ferguson,
B.M.Mckeever,
S.Xu,
D.Wisniewski,
D.K.Miller,
T.T.Yamin,
R.H.Spencer,
L.Chu,
F.Ujjainwalla,
B.R.Cunningham,
J.F.Evans,
J.W.Becker.
Crystal Structure of Inhibitor-Bound Human 5-Lipoxygenase-Activating Protein. Science V. 317 510 2007.
ISSN: ISSN 0036-8075
PubMed: 17600184
DOI: 10.1126/SCIENCE.1144346
Page generated: Sat Jul 20 10:31:16 2024
|