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Chlorine in PDB 2q8n: Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution

Enzymatic activity of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution

All present enzymatic activity of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution:
5.3.1.9;

Protein crystallography data

The structure of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution, PDB code: 2q8n was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.93 / 1.82
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 117.506, 125.867, 245.476, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution (pdb code 2q8n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution, PDB code: 2q8n:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2q8n

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Chlorine binding site 1 out of 4 in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl451

b:41.2
occ:1.00
 O A:HOH533 3.0 43.0 1.0
O B:HOH633 3.1 59.8 1.0
O B:HOH528 3.2 45.3 1.0
N A:LYS302 3.5 45.9 1.0
N B:LYS302 3.5 45.7 1.0
CA B:VAL301 3.9 44.4 1.0
CA A:VAL301 4.0 44.7 1.0
CG1 B:VAL301 4.0 50.0 1.0
O A:LYS302 4.1 45.8 1.0
O B:LYS302 4.2 45.5 1.0
CG2 A:VAL301 4.2 43.7 1.0
C B:VAL301 4.2 44.4 1.0
CG1 A:VAL301 4.3 46.6 1.0
C A:VAL301 4.3 44.8 1.0
CB B:VAL301 4.3 46.1 1.0
CG2 B:VAL301 4.3 40.0 1.0
CB A:VAL301 4.4 45.5 1.0
CB A:LYS302 4.4 47.9 1.0
NE A:ARG276 4.4 49.1 1.0
CA A:LYS302 4.4 47.0 1.0
CA B:LYS302 4.5 47.4 1.0
CB B:LYS302 4.5 49.5 1.0
NE B:ARG276 4.6 45.5 1.0
O B:PRO300 4.7 42.9 1.0
O A:PRO300 4.7 42.9 1.0
C A:LYS302 4.8 43.9 1.0
C B:LYS302 4.8 43.7 1.0
NH2 A:ARG276 5.0 55.5 1.0

Chlorine binding site 2 out of 4 in 2q8n

Go back to Chlorine Binding Sites List in 2q8n
Chlorine binding site 2 out of 4 in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl452

b:85.8
occ:1.00
 O A:HOH565 3.4 50.9 1.0
NH2 A:ARG187 3.7 57.4 1.0
NH1 A:ARG187 4.0 47.6 1.0
CZ A:ARG187 4.3 52.6 1.0
CB A:TRP62 4.5 42.7 1.0
N A:TRP62 5.0 44.6 1.0

Chlorine binding site 3 out of 4 in 2q8n

Go back to Chlorine Binding Sites List in 2q8n
Chlorine binding site 3 out of 4 in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl451

b:69.7
occ:1.00
 O B:HOH500 3.3 48.9 1.0
CA B:ARG187 3.9 36.4 1.0
N B:SER188 3.9 36.1 1.0
CB B:ARG187 4.2 37.8 1.0
O B:SER188 4.3 37.6 1.0
C B:ARG187 4.4 37.9 1.0
CG B:ARG187 4.5 40.5 1.0
O B:PHE186 4.8 41.1 1.0
OG B:SER188 4.9 39.3 1.0
N B:ARG187 5.0 36.4 1.0

Chlorine binding site 4 out of 4 in 2q8n

Go back to Chlorine Binding Sites List in 2q8n
Chlorine binding site 4 out of 4 in the Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Glucose-6-Phosphate Isomerase (Ec 5.3.1.9) (TM1385) From Thermotoga Maritima at 1.82 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl451

b:48.5
occ:0.50
 O C:HOH536 3.5 51.4 1.0
N C:LYS302 3.7 46.4 1.0
O C:LYS302 4.1 46.3 1.0
CA C:VAL301 4.2 44.9 1.0
CG2 C:VAL301 4.2 46.8 1.0
CG1 C:VAL301 4.3 49.1 1.0
CB C:VAL301 4.5 48.4 1.0
C C:VAL301 4.5 44.9 1.0
CA C:LYS302 4.6 47.4 1.0
CB C:LYS302 4.6 49.8 1.0
C C:LYS302 4.8 44.1 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Jul 20 10:32:52 2024

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