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Chlorine in PDB 2qsq: Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea)

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea), PDB code: 2qsq was solved by I.Le Trong, N.Korotkova, S.L.Moseley, R.E.Stenkamp, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.95
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 132.531, 132.531, 82.762, 90.00, 90.00, 120.00
R / Rfree (%) 18 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea) (pdb code 2qsq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea), PDB code: 2qsq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2qsq

Go back to Chlorine Binding Sites List in 2qsq
Chlorine binding site 1 out of 2 in the Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:54.5
occ:1.00
NZ A:LYS35 2.7 41.5 0.5
O A:HOH443 2.9 38.7 0.5
O A:HOH442 3.2 65.0 1.0
N A:PHE85 3.3 38.1 1.0
CA A:GLY84 3.9 39.7 1.0
CA A:GLY36 4.0 37.5 1.0
CD1 A:PHE85 4.0 42.8 1.0
O A:PHE85 4.0 35.7 1.0
CB A:PHE85 4.0 38.1 1.0
CA A:PHE85 4.1 37.9 1.0
C A:GLY84 4.1 39.0 1.0
CE A:LYS35 4.1 39.1 1.0
N A:GLY36 4.3 36.8 1.0
CG A:PHE85 4.5 39.0 1.0
NH1 A:ARG43 4.5 47.3 1.0
C A:PHE85 4.5 36.6 1.0
NZ A:LYS35 4.6 33.2 0.5
CG A:LYS35 4.9 37.6 1.0
C A:GLY36 4.9 38.2 1.0
CD A:LYS35 5.0 38.5 1.0

Chlorine binding site 2 out of 2 in 2qsq

Go back to Chlorine Binding Sites List in 2qsq
Chlorine binding site 2 out of 2 in the Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the N-Terminal Domain of Carcinoembryonic Antigen (Cea) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:50.2
occ:1.00
NZ B:LYS35 2.8 40.5 0.5
N B:PHE85 3.2 40.1 1.0
O B:HOH426 3.5 39.7 0.5
CD1 B:PHE85 3.9 45.1 1.0
CB B:PHE85 3.9 40.3 1.0
CA B:GLY84 4.0 41.1 1.0
O B:PHE85 4.0 38.1 1.0
CA B:PHE85 4.1 39.9 1.0
C B:GLY84 4.1 40.6 1.0
CA B:GLY36 4.1 35.2 1.0
CE B:LYS35 4.3 37.4 1.0
CG B:PHE85 4.4 42.5 1.0
N B:GLY36 4.5 35.2 1.0
C B:PHE85 4.5 38.6 1.0
NZ B:LYS35 4.6 31.9 0.5
O B:ALA83 4.8 42.9 1.0
CE1 B:PHE85 4.9 46.0 1.0

Reference:

N.Korotkova, Y.Yang, I.Le Trong, E.Cota, B.Demeler, J.Marchant, W.E.Thomas, R.E.Stenkamp, S.L.Moseley, S.Matthews. Binding of Dr Adhesins of Escherichia Coli to Carcinoembryonic Antigen Triggers Receptor Dissociation. Mol.Microbiol. V. 67 420 2008.
ISSN: ISSN 0950-382X
PubMed: 18086185
DOI: 10.1111/J.1365-2958.2007.06054.X
Page generated: Sat Jul 20 10:54:43 2024

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