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Chlorine in PDB 2qsz: Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide

Protein crystallography data

The structure of Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide, PDB code: 2qsz was solved by W.M.Rabeh, W.Tempel, L.Nedyalkova, R.Landry, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, C.Brenner, H.Park, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.64 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 55.921, 142.342, 62.434, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 25.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide (pdb code 2qsz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide, PDB code: 2qsz:

Chlorine binding site 1 out of 1 in 2qsz

Go back to Chlorine Binding Sites List in 2qsz
Chlorine binding site 1 out of 1 in the Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Nicotinamide Riboside Kinase 1 in Complex with Nicotinamide Mononucleotide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:42.9
occ:1.00
N A:MSE63 3.1 21.3 1.0
N A:GLU64 3.6 19.9 1.0
O A:LEU61 3.6 24.3 1.0
CB A:MSE63 3.8 24.7 1.0
CA A:MSE63 3.8 23.6 1.0
C A:ASN62 4.0 19.6 1.0
CG A:GLU64 4.0 28.4 1.0
CA A:ASN62 4.0 22.8 1.0
OD1 A:ASN62 4.1 26.1 1.0
C A:MSE63 4.2 23.1 1.0
CB A:GLU64 4.5 23.8 1.0
OE2 A:GLU64 4.5 36.8 1.0
C A:LEU61 4.6 21.1 1.0
CG A:MSE63 4.6 25.9 1.0
CA A:GLU64 4.6 24.5 1.0
CD A:GLU64 4.7 31.5 1.0
N A:ASN62 4.8 21.5 1.0
CG A:ASN62 4.9 27.5 1.0

Reference:

W.Tempel, W.M.Rabeh, K.L.Bogan, P.Belenky, M.Wojcik, H.F.Seidle, L.Nedyalkova, T.Yang, A.A.Sauve, H.W.Park, C.Brenner. Nicotinamide Riboside Kinase Structures Reveal New Pathways to Nad(+). Plos Biol. V. 5 E263 2007.
ISSN: ISSN 1544-9173
PubMed: 17914902
DOI: 10.1371/JOURNAL.PBIO.0050263
Page generated: Sat Jul 20 10:54:55 2024

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