Chlorine in PDB 2ret: The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus

The structure of The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus, PDB code: 2ret was solved by M.E.Yanez, K.V.Korotkov, J.Abendroth, W.G.J.Hol, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.39 / 2.21
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	63.288, 79.145, 82.079, 65.00, 69.19, 69.49
R / Rfree (%)	18.5 / 24.5

The structure of The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Chlorine atom in the The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus (pdb code 2ret). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus, PDB code: 2ret:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1 b:33.5 occ:1.00 NH2 D:ARG93 3.2 21.9 1.0 NH2 B:ARG93 3.3 20.1 1.0 O B:HOH246 3.4 27.6 1.0 NE2 D:GLN57 3.5 14.3 1.0 O D:HOH216 3.6 43.8 1.0 NH1 B:ARG93 3.6 23.0 1.0 NH1 D:ARG93 3.8 22.5 1.0 CB B:SER53 3.9 16.2 1.0 CZ B:ARG93 3.9 23.3 1.0 CZ D:ARG93 4.0 23.2 1.0 CB D:SER53 4.1 15.1 1.0 NE2 B:GLN57 4.2 25.5 1.0 OG B:SER53 4.3 18.4 1.0 OG D:SER53 4.5 17.4 1.0 O D:HOH258 4.5 32.5 1.0 CD D:GLN57 4.7 13.6 1.0 O D:SER53 4.8 15.8 1.0 O D:GLY95 4.8 19.5 1.0 O B:HOH202 4.8 26.6 1.0 O B:GLY95 4.8 18.0 1.0 CA B:SER53 4.9 16.5 1.0 O B:SER53 5.0 16.9 1.0 CA D:SER53 5.0 16.0 1.0

Chlorine binding site 2 out of 2 in the The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ F:Cl2 b:32.7 occ:1.00 NH2 F:ARG93 3.2 19.8 1.0 NH2 H:ARG93 3.2 27.1 1.0 O F:HOH206 3.5 32.7 1.0 NH1 F:ARG93 3.7 23.5 1.0 OE1 H:GLN57 3.7 26.6 1.0 CB F:SER53 3.9 16.4 1.0 NH1 H:ARG93 3.9 26.9 1.0 CZ F:ARG93 3.9 22.6 1.0 CZ H:ARG93 4.0 27.5 1.0 OG F:SER53 4.2 19.2 1.0 CB H:SER53 4.2 25.9 1.0 NE2 F:GLN57 4.2 22.7 1.0 O F:HOH266 4.2 53.6 1.0 OG H:SER53 4.6 27.0 1.0 O H:HOH210 4.7 37.5 1.0 O F:HOH210 4.7 33.6 1.0 O F:SER53 4.8 15.7 1.0 O F:GLY95 4.8 19.5 1.0 CD H:GLN57 4.8 24.3 1.0 O H:SER53 4.9 25.9 1.0 CA F:SER53 4.9 17.0 1.0 O H:GLY95 5.0 22.2 1.0

M.E.Yanez, K.V.Korotkov, J.Abendroth, W.G.Hol. The Crystal Structure of A Binary Complex of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus. J.Mol.Biol. V. 375 471 2008.
ISSN: ISSN 0022-2836
PubMed: 18022192
DOI: 10.1016/J.JMB.2007.10.035