Atomistry » Chlorine » PDB 2uxn-2v6g » 2v5a
Atomistry »
  Chlorine »
    PDB 2uxn-2v6g »
      2v5a »

Chlorine in PDB 2v5a: Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3

Enzymatic activity of Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3

All present enzymatic activity of Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3:
6.3.4.14;

Protein crystallography data

The structure of Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3, PDB code: 2v5a was solved by I.Mochalkin, J.R.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.32 / 2.31
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 84.315, 106.410, 122.184, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3 (pdb code 2v5a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3, PDB code: 2v5a:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2v5a

Go back to Chlorine Binding Sites List in 2v5a
Chlorine binding site 1 out of 2 in the Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1448

b:24.8
occ:1.00
O A:HOH2125 3.2 25.3 1.0
N A:VAL295 3.3 23.8 1.0
NH2 A:ARG292 3.3 29.5 1.0
NE2 A:GLN294 3.4 28.3 1.0
NE A:ARG292 3.4 27.4 1.0
O A:HOH2062 3.4 33.8 1.0
CG2 A:VAL295 3.6 23.1 1.0
CB A:GLN294 3.6 25.4 1.0
CA A:GLN294 3.6 25.1 1.0
CZ A:ARG292 3.8 28.9 1.0
CG A:GLN294 3.8 26.9 1.0
CB A:TYR82 4.0 20.5 1.0
C A:GLN294 4.0 24.5 1.0
CD A:GLN294 4.1 28.6 1.0
O A:HOH2124 4.1 39.7 1.0
CB A:VAL295 4.2 22.9 1.0
CG A:TYR82 4.2 19.5 1.0
CA A:VAL295 4.3 23.0 1.0
O A:HOH2140 4.5 32.3 1.0
OE2 A:GLU296 4.5 21.7 1.0
CD2 A:TYR82 4.6 18.7 1.0
CD A:ARG292 4.6 26.9 1.0
CD1 A:TYR82 4.7 19.0 1.0
O A:ILE293 4.7 25.7 1.0
N A:GLN294 4.9 25.4 1.0

Chlorine binding site 2 out of 2 in 2v5a

Go back to Chlorine Binding Sites List in 2v5a
Chlorine binding site 2 out of 2 in the Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Biotin Carboxylase From E.Coli in Complex with Potent Inhibitor 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1446

b:34.5
occ:1.00
NH1 B:ARG292 2.8 32.4 1.0
O B:HOH2106 3.2 32.5 1.0
O B:HOH2092 3.2 29.8 1.0
N B:VAL295 3.3 23.5 1.0
CG2 B:VAL295 3.5 22.6 1.0
CZ B:ARG292 3.6 31.7 1.0
NH2 B:ARG292 3.7 30.8 1.0
CA B:GLN294 3.7 24.3 1.0
CB B:GLN294 3.9 24.1 1.0
CG B:GLN294 3.9 25.4 1.0
C B:GLN294 4.1 23.9 1.0
CB B:VAL295 4.1 23.1 1.0
CB B:TYR82 4.1 22.8 1.0
CG B:TYR82 4.3 22.6 1.0
CA B:VAL295 4.3 22.9 1.0
OE2 B:GLU296 4.4 25.0 1.0
OE1 B:GLN294 4.4 28.5 1.0
CD1 B:TYR82 4.6 22.1 1.0
CD B:GLN294 4.6 26.2 1.0
O B:ILE293 4.6 24.2 1.0
CD2 B:TYR82 4.7 21.9 1.0
NE B:ARG292 4.8 30.7 1.0
N B:GLN294 5.0 24.2 1.0

Reference:

J.R.Miller, S.Dunham, I.Mochalkin, C.Banotai, M.Bowman, S.Buist, B.Dunkle, D.Hanna, H.J.Harwood, M.D.Huband, A.Karnovsky, M.Kuhn, C.Limberakis, J.Y.Liu, S.Mehrens, W.T.Mueller, L.Narasimhan, A.Ogden, J.Ohren, J.V.Prasad, J.A.Shelly, L.Skerlos, M.Sulavik, V.H.Thomas, S.Vanderroest, L.Wang, Z.Wang, A.Whitton, T.Zhu, C.K.Stover. A Class of Selective Antibacterials Derived From A Protein Kinase Inhibitor Pharmacophore. Proc.Natl.Acad.Sci.Usa V. 106 1737 2009.
ISSN: ISSN 0027-8424
PubMed: 19164768
DOI: 10.1073/PNAS.0811275106
Page generated: Sat Jul 20 11:37:16 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy