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Chlorine in PDB 2vli: Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein

Protein crystallography data

The structure of Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein, PDB code: 2vli was solved by S.Macedo, U.Kapp, I.Leiros, D.R.Hall, E.Mitchell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.90 / 1.95
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 81.360, 118.160, 81.110, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 21.4

Other elements in 2vli:

The structure of Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein also contains other interesting chemical elements:

Cadmium (Cd) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein (pdb code 2vli). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein, PDB code: 2vli:

Chlorine binding site 1 out of 1 in 2vli

Go back to Chlorine Binding Sites List in 2vli
Chlorine binding site 1 out of 1 in the Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Deinococcus Radiodurans Tunicamycin Resistance Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1178

b:17.8
occ:1.00
CD A:CD1177 2.6 14.4 1.0
N A:HIS150 3.2 15.9 1.0
N B:HIS150 3.2 13.9 1.0
OE2 B:GLU145 3.6 16.7 1.0
ND1 A:HIS150 3.6 13.8 1.0
CB A:HIS150 3.7 17.3 1.0
ND1 B:HIS150 3.7 14.9 1.0
CB A:GLN148 3.8 18.0 1.0
OE1 A:GLU145 3.8 13.2 1.0
CA A:THR149 3.9 16.4 1.0
CA B:THR149 4.0 14.3 1.0
CB B:HIS150 4.0 16.0 1.0
CA A:HIS150 4.0 15.4 1.0
CG A:HIS150 4.0 17.6 1.0
O B:HIS150 4.0 15.4 1.0
C A:THR149 4.1 16.5 1.0
C B:THR149 4.1 15.0 1.0
CA B:HIS150 4.1 14.7 1.0
CG2 B:THR149 4.1 14.1 1.0
CG B:HIS150 4.2 16.8 1.0
O A:HIS150 4.3 15.9 1.0
CB B:GLN148 4.4 16.6 1.0
CG2 A:THR149 4.4 18.7 1.0
CA A:GLN148 4.4 16.7 1.0
CD B:GLU145 4.5 15.4 1.0
C B:HIS150 4.5 15.2 1.0
CB B:THR149 4.6 14.6 1.0
OE1 B:GLU145 4.6 16.8 1.0
C A:HIS150 4.7 16.7 1.0
CB A:THR149 4.7 16.8 1.0
CE1 A:HIS150 4.7 14.8 1.0
OE2 A:GLU145 4.7 14.4 1.0
O B:HOH2129 4.7 22.8 1.0
CD A:GLU145 4.7 14.2 1.0
CE1 B:HIS150 4.8 14.5 1.0
CA B:GLN148 4.8 16.1 1.0
O A:HOH2061 4.8 18.8 1.0
NE2 A:GLN148 4.8 11.7 1.0
O B:HOH2123 4.9 31.7 1.0
CG A:GLN148 5.0 16.7 1.0
OG1 A:THR149 5.0 18.5 1.0

Reference:

U.Kapp, S.Macedo, D.R.Hall, I.Leiros, S.M.Mcsweeney, E.Mitchell. Structure of Deinococcus Radiodurans Tunicamycin-Resistance Protein (Tmrd), A Phosphotransferase. Acta Crystallogr.,Sect.F V. 64 479 2008.
ISSN: ESSN 1744-3091
PubMed: 18540055
DOI: 10.1107/S1744309108011822
Page generated: Sat Jul 20 12:00:00 2024

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