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Chlorine in PDB 2vr1: Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P.

Enzymatic activity of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P.

All present enzymatic activity of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P.:
6.3.4.14;

Protein crystallography data

The structure of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P., PDB code: 2vr1 was solved by I.Mochalkin, G.L.Waldrop, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 84.129, 106.784, 121.910, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 24.7

Other elements in 2vr1:

The structure of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P. also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P. (pdb code 2vr1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P., PDB code: 2vr1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2vr1

Go back to Chlorine Binding Sites List in 2vr1
Chlorine binding site 1 out of 2 in the Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1447

b:52.8
occ:1.00
O A:HOH2083 2.8 20.0 1.0
N A:VAL295 3.2 35.6 1.0
NH2 A:ARG292 3.4 39.6 1.0
CG2 A:VAL295 3.4 35.1 1.0
CA A:GLN294 3.8 36.5 1.0
CB A:GLN294 3.9 36.7 1.0
CB A:VAL295 3.9 35.0 1.0
NE A:ARG292 3.9 39.4 1.0
C A:GLN294 4.0 35.9 1.0
CG A:GLN294 4.1 37.7 1.0
OE2 A:GLU296 4.1 36.2 1.0
CZ A:ARG292 4.1 40.1 1.0
CA A:VAL295 4.1 35.3 1.0
CB A:TYR82 4.3 33.5 1.0
OE1 A:GLN294 4.4 42.2 1.0
CD A:GLN294 4.5 38.3 1.0
CG A:TYR82 4.6 33.8 1.0
O A:HOH2028 4.8 31.5 1.0
O A:ILE293 4.9 36.9 1.0
CD2 A:TYR82 4.9 33.9 1.0
NH2 A:ARG338 4.9 36.6 1.0
CD A:GLU296 5.0 36.9 1.0

Chlorine binding site 2 out of 2 in 2vr1

Go back to Chlorine Binding Sites List in 2vr1
Chlorine binding site 2 out of 2 in the Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Biotin Carboxylase From E. Coli in Complex with Atp Analog, ADPCF2P. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1447

b:52.6
occ:1.00
O B:HOH2060 2.5 29.4 1.0
N B:VAL295 3.1 38.6 1.0
CG2 B:VAL295 3.2 38.9 1.0
NH1 B:ARG292 3.4 42.5 1.0
O B:HOH2083 3.5 29.9 1.0
CB B:VAL295 3.6 38.5 1.0
CA B:GLN294 3.8 39.3 1.0
O B:HOH2032 3.8 51.0 1.0
CB B:GLN294 3.9 39.1 1.0
CA B:VAL295 3.9 38.5 1.0
C B:GLN294 3.9 39.1 1.0
OE2 B:GLU296 4.0 38.4 1.0
NH2 B:ARG292 4.0 43.5 1.0
CZ B:ARG292 4.1 42.5 1.0
CG B:GLN294 4.2 39.3 1.0
CB B:TYR82 4.6 36.3 1.0
NH2 B:ARG338 4.6 40.9 1.0
CG B:TYR82 4.6 36.7 1.0
CD1 B:TYR82 4.8 36.4 1.0
NE2 B:GLN294 4.9 41.0 1.0
CD B:GLN294 4.9 39.9 1.0
O B:ILE293 5.0 39.4 1.0
CD2 B:TYR82 5.0 36.2 1.0

Reference:

I.Mochalkin, J.R.Miller, A.Evdokimov, S.Lightle, C.Yan, C.K.Stover, G.L.Waldrop. Structural Evidence For Substrate-Induced Synergism and Half-Sites Reactivity in Biotin Carboxylase. Protein Sci. V. 17 1706 2008.
ISSN: ISSN 0961-8368
PubMed: 18725455
DOI: 10.1110/PS.035584.108
Page generated: Sat Jul 20 12:09:58 2024

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