Atomistry » Chlorine » PDB 2vo5-2vv7 » 2vrs
Atomistry »
  Chlorine »
    PDB 2vo5-2vv7 »
      2vrs »

Chlorine in PDB 2vrs: Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form

Protein crystallography data

The structure of Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form, PDB code: 2vrs was solved by P.Guardado-Calvo, G.C.Fox, A.L.Llamas-Saiz, J.Benavente, M.J.Van Raaij, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.43 / 1.75
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 142.789, 54.008, 121.336, 90.00, 101.79, 90.00
R / Rfree (%) 18 / 21.8

Other elements in 2vrs:

The structure of Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form (pdb code 2vrs). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form, PDB code: 2vrs:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2vrs

Go back to Chlorine Binding Sites List in 2vrs
Chlorine binding site 1 out of 2 in the Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1327

b:28.2
occ:1.00
ND2 B:ASN138 3.1 26.4 1.0
ND2 A:ASN138 3.1 22.5 1.0
ND2 C:ASN138 3.1 23.6 1.0
CB C:ASN138 3.8 22.8 1.0
CB B:ASN138 3.9 22.0 1.0
CB A:ASN138 3.9 20.9 1.0
CG C:ASN138 4.0 23.8 1.0
CG1 C:ILE135 4.0 20.6 1.0
CG B:ASN138 4.0 27.1 1.0
CG A:ASN138 4.0 19.3 1.0
CA C:ILE135 4.1 28.3 1.0
CG1 B:ILE135 4.1 17.3 1.0
CG1 A:ILE135 4.1 18.0 1.0
CA B:ILE135 4.2 23.2 1.0
CA A:ILE135 4.2 18.0 1.0
CG2 C:ILE135 4.3 25.4 1.0
CG2 A:ILE135 4.3 20.9 1.0
CB C:ILE135 4.3 28.7 1.0
CB A:ILE135 4.5 17.3 1.0
CB B:ILE135 4.5 19.2 1.0
O C:ILE135 4.6 26.7 1.0
CG2 B:ILE135 4.7 23.6 1.0
O A:ILE135 4.7 20.5 1.0
O B:ILE135 4.8 24.8 1.0
C C:ILE135 4.9 31.2 1.0
N C:ILE135 5.0 26.7 1.0
C B:ILE135 5.0 24.2 1.0

Chlorine binding site 2 out of 2 in 2vrs

Go back to Chlorine Binding Sites List in 2vrs
Chlorine binding site 2 out of 2 in the Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Avian Reovirus SIGMAC117-326, C2 Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1328

b:25.4
occ:0.50
ND2 C:ASN124 3.1 35.6 1.0
ND2 B:ASN124 3.2 32.1 1.0
ND2 A:ASN124 3.4 31.6 1.0
CB A:ASN124 3.6 35.9 1.0
CB C:ASN124 3.8 29.2 1.0
O A:HOH2001 3.9 39.6 1.0
CG C:ASN124 3.9 32.9 1.0
CA C:VAL121 4.0 33.5 1.0
CB B:ASN124 4.0 36.0 1.0
CG A:ASN124 4.0 33.4 1.0
CG B:ASN124 4.1 32.1 1.0
CG2 C:VAL121 4.4 35.6 1.0
N C:VAL121 4.5 36.5 1.0
O C:THR120 4.5 39.2 1.0
CB C:VAL121 4.6 27.2 1.0
CG2 C:THR120 4.6 35.4 1.0
C C:THR120 4.7 37.9 1.0
CA A:ASN124 4.8 33.6 1.0
O C:VAL121 4.8 32.2 1.0
CG1 C:VAL121 4.9 30.0 1.0
C C:VAL121 4.9 33.7 1.0
N A:ASN124 5.0 41.4 1.0

Reference:

P.Guardado-Calvo, G.C.Fox, A.L.Llamas-Saiz, M.J.Van Raaij. Crystallographic Structure of the Alpha-Helical Triple Coiled-Coil Domain of Avian Reovirus S1133 Fibre. J. Gen. Virol. V. 90 672 2009.
ISSN: ISSN 0022-1317
PubMed: 19218213
DOI: 10.1099/VIR.0.008276-0
Page generated: Sat Dec 12 09:21:29 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy