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Chlorine in PDB 2w4m: The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp

Enzymatic activity of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp

All present enzymatic activity of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp:
3.1.3.29;

Protein crystallography data

The structure of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp, PDB code: 2w4m was solved by E.Ugochukwu, R.Cocking, W.W.Yue, A.C.W.Pike, A.Roos, J.R.C.Muniz, F.Vondelft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, U.Oppermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.42 / 2.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 122.740, 122.740, 74.550, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 21.2

Other elements in 2w4m:

The structure of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp (pdb code 2w4m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp, PDB code: 2w4m:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2w4m

Go back to Chlorine Binding Sites List in 2w4m
Chlorine binding site 1 out of 2 in the The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1246

b:51.0
occ:1.00
O A:HOH2088 2.5 42.5 1.0
NA A:NA1245 2.9 38.1 1.0
ND2 A:ASN15 3.4 29.9 1.0
OG1 A:THR190 3.4 28.0 1.0
OD1 A:ASP189 3.7 33.2 1.0
OD2 A:ASP189 3.8 32.6 1.0
O A:HOH2075 4.0 24.6 1.0
O A:ASP14 4.1 28.2 1.0
CG A:ASP189 4.2 26.1 1.0
CG A:ASN15 4.5 22.3 1.0
CB A:ASN15 4.7 24.3 1.0
CB A:THR190 4.8 22.6 1.0
O3 A:PO41249 4.8 45.6 1.0
C A:ASP14 4.9 28.5 1.0
O A:HOH2013 4.9 38.8 1.0
CB A:ASP14 4.9 32.8 1.0
O A:HOH2086 4.9 43.5 1.0

Chlorine binding site 2 out of 2 in 2w4m

Go back to Chlorine Binding Sites List in 2w4m
Chlorine binding site 2 out of 2 in the The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1247

b:54.0
occ:1.00
NZ A:LYS55 3.3 24.9 1.0
NZ A:LYS58 3.5 31.5 1.0
O A:HOH2033 3.5 32.9 1.0
O A:HOH2005 3.8 37.4 1.0
CE A:LYS58 4.7 31.1 1.0
OE2 A:GLU82 4.7 39.0 1.0
CE A:LYS55 4.7 25.2 1.0
CG A:LYS55 5.0 24.6 1.0

Reference:

E.Ugochukwu, R.Cocking, W.W.Yue, A.C.W.Pike, A.Roos, J.R.C.Muniz, F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, U.Oppermann. The Crystal Structure of Human N-Acetylneuraminic Acid Phosphatase, Nanp To Be Published.
Page generated: Sat Jul 20 12:32:25 2024

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