Chlorine in PDB 2w7z: Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde.

The structure of Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde., PDB code: 2w7z was solved by M.W.Vetting, S.S.Hegde, J.S.Blanchard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	94.07 / 1.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	36.930, 63.139, 94.619, 90.00, 96.09, 90.00
R / Rfree (%)	19 / 22.2

The binding sites of Chlorine atom in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde. (pdb code 2w7z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde., PDB code: 2w7z:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1212 b:28.9 occ:1.00 N A:ASN187 3.2 15.7 1.0 CB A:ASN187 3.4 17.0 1.0 CG A:ASN187 3.6 18.4 1.0 CB A:SER185 3.7 14.3 1.0 O A:HOH2192 3.7 30.4 1.0 ND2 A:ASN187 3.7 21.9 1.0 N A:PRO186 3.7 14.6 1.0 CD A:PRO186 3.8 14.3 1.0 CA A:ASN187 3.9 15.9 1.0 C A:SER185 3.9 14.1 1.0 CA A:SER185 4.1 13.5 1.0 C A:PRO186 4.2 15.2 1.0 OD1 A:ASN187 4.3 20.7 1.0 CD1 A:TYR188 4.3 17.2 1.0 CA A:PRO186 4.4 15.1 1.0 OG A:SER185 4.4 12.5 1.0 CE1 A:TYR188 4.4 16.5 1.0 CB A:PRO186 4.5 15.4 1.0 O A:SER185 4.6 14.0 1.0 CG A:PRO186 4.6 15.8 1.0 C A:ASN187 4.8 15.4 1.0 N A:TYR188 5.0 14.7 1.0

Chlorine binding site 2 out of 4 in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1213 b:31.1 occ:1.00 O A:HOH2169 2.3 32.2 1.0 N A:LEU154 3.1 11.0 1.0 N A:ASP173 3.2 14.7 1.0 O A:ASP173 3.3 16.9 1.0 O A:LEU154 3.4 12.1 1.0 NE2 A:GLN176 3.5 20.0 1.0 O A:HOH2082 3.7 43.1 1.0 CA A:LEU153 3.7 11.7 1.0 CB A:ASP173 3.8 14.8 1.0 CA A:ASP173 3.8 14.5 1.0 C A:ASP173 3.9 14.8 1.0 C A:LEU153 3.9 11.8 1.0 CA A:LEU154 4.1 11.7 1.0 C A:LEU154 4.1 12.1 1.0 C A:LEU172 4.2 14.7 1.0 O A:LEU152 4.3 11.5 1.0 CA A:LEU172 4.3 14.1 1.0 CG A:LEU153 4.4 15.8 1.0 CB A:LEU153 4.5 12.1 1.0 CD2 A:LEU153 4.5 19.7 1.0 CB A:LEU154 4.5 11.7 1.0 CD1 A:LEU154 4.5 13.7 1.0 CD2 A:LEU172 4.6 12.8 1.0 CB A:LEU172 4.7 13.8 1.0 CD A:GLN176 4.7 16.3 1.0 N A:LEU153 4.7 11.1 1.0 C A:LEU152 4.9 10.5 1.0 ND2 A:ASN177 4.9 18.6 1.0 CG A:ASP173 5.0 13.2 1.0

Chlorine binding site 3 out of 4 in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1212 b:16.2 occ:1.00 OG1 B:THR93 3.3 14.7 1.0 NH2 B:ARG73 3.3 12.8 1.0 CB B:THR93 3.7 13.3 1.0 CG2 B:THR93 3.8 14.2 1.0 CD B:ARG73 3.8 13.1 1.0 CD B:PRO9 4.0 15.0 1.0 O B:HOH2113 4.2 33.1 1.0 CZ B:ARG73 4.3 13.3 1.0 CB B:PRO8 4.5 14.3 1.0 CG B:PRO9 4.5 15.6 1.0 NE B:ARG73 4.5 12.6 1.0 CG B:ARG73 4.6 11.5 1.0 CB B:ARG73 4.9 12.7 1.0 CD2 B:LEU113 4.9 9.9 1.0 CA B:PRO8 5.0 14.2 1.0

Chlorine binding site 4 out of 4 in the Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of the Pentapeptide Repeat Protein Efsqnr, A Dna Gyrase Inhibitor. Free Amines Modified By Cyclic Pentylation with Glutaraldehyde. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1213 b:28.6 occ:1.00 O B:HOH2188 3.2 24.1 1.0 N B:PHE179 3.2 11.3 1.0 NE2 B:GLN198 3.3 11.5 1.0 O B:HOH2171 3.4 28.4 1.0 O B:PHE179 3.4 11.5 1.0 CA B:THR178 3.5 12.2 1.0 CG B:GLN198 3.6 10.5 1.0 C B:THR178 3.9 11.9 1.0 CB B:THR178 3.9 13.3 1.0 CD B:GLN198 4.0 10.0 1.0 O B:ASN177 4.1 11.1 1.0 C B:PHE179 4.1 11.2 1.0 CG2 B:THR178 4.1 15.3 1.0 CA B:PHE179 4.3 10.9 1.0 O B:HOH2170 4.3 28.6 1.0 N B:THR178 4.7 11.4 1.0 CD1 B:PHE179 4.7 10.1 1.0 OE2 B:GLU197 4.7 24.5 1.0 C B:ASN177 4.8 11.5 1.0 CG B:PHE179 4.9 11.9 1.0

M.W.Vetting, S.S.Hegde, J.S.Blanchard. Crystallization of A Pentapeptide-Repeat Protein By Reductive Cyclic Pentylation of Free Amines with Glutaraldehyde. Acta Crystallogr.,Sect.D V. 65 462 2009.
ISSN: ISSN 0907-4449
PubMed: 19390151
DOI: 10.1107/S0907444909008324