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Chlorine in PDB 2xjp: X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose

Protein crystallography data

The structure of X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose, PDB code: 2xjp was solved by M.Veelders, S.Brueckner, D.Ott, C.Unverzagt, H.-U.Moesch, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 0.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.280, 61.820, 106.260, 90.00, 90.00, 90.00
R / Rfree (%) 10.523 / 12.236

Other elements in 2xjp:

The structure of X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose (pdb code 2xjp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose, PDB code: 2xjp:

Chlorine binding site 1 out of 1 in 2xjp

Go back to Chlorine Binding Sites List in 2xjp
Chlorine binding site 1 out of 1 in the X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the N-Terminal Domain of the Flocculin FLO5 From Saccharomyces Cerevisiae in Complex with Calcium and Mannose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1274

b:8.0
occ:1.00
H A:GLY111 2.5 6.7 1.0
H A:GLY109 2.6 6.5 1.0
HA A:LYS108 2.9 5.8 0.5
HA A:LYS108 3.0 6.8 0.3
OH A:TYR102 3.1 7.4 1.0
HA3 A:GLY111 3.1 6.7 1.0
HH A:TYR102 3.1 7.5 0.0
HE2 A:TYR102 3.3 6.9 1.0
N A:GLY109 3.3 6.5 1.0
N A:GLY111 3.3 6.7 1.0
H A:MET110 3.3 6.5 1.0
HD3 A:LYS108 3.5 12.8 0.2
O A:CYS107 3.6 6.3 1.0
CA A:GLY111 3.7 6.8 1.0
CA A:LYS108 3.8 6.7 0.2
CA A:LYS108 3.8 6.8 0.3
CA A:LYS108 3.8 5.8 0.5
CZ A:TYR102 3.9 6.8 1.0
CE2 A:TYR102 3.9 6.9 1.0
N A:MET110 3.9 6.5 1.0
HG2 A:LYS108 3.9 6.8 0.5
C A:LYS108 4.0 6.2 1.0
HD3 A:LYS108 4.1 9.1 0.3
CA A:GLY109 4.2 7.4 1.0
HA3 A:GLY109 4.2 7.3 1.0
C A:CYS107 4.3 5.6 1.0
CD A:LYS108 4.3 12.9 0.2
C A:GLY109 4.4 7.0 1.0
HA2 A:GLY111 4.4 6.7 1.0
HD3 A:LYS108 4.4 5.9 0.5
C A:MET110 4.4 6.8 1.0
HD2 A:LYS108 4.4 12.8 0.2
N A:LYS108 4.5 5.7 1.0
C A:GLY111 4.6 6.4 1.0
CG A:LYS108 4.7 6.9 0.5
O A:GLY111 4.7 6.6 1.0
CA A:MET110 4.8 6.8 1.0
CB A:LYS108 4.9 6.5 0.5
H A:CYS107 4.9 5.7 1.0
HG2 A:LYS108 4.9 12.6 0.2
CD A:LYS108 4.9 9.0 0.3
CB A:LYS108 4.9 8.8 0.2
HZ1 A:LYS108 4.9 9.8 0.2
HE2 A:LYS108 4.9 6.5 0.5
HB3 A:LYS108 4.9 7.7 0.3
HD2 A:LYS108 4.9 9.1 0.3
CG A:LYS108 5.0 12.7 0.2
CB A:LYS108 5.0 7.8 0.3

Reference:

M.Veelders, S.Brueckner, D.Ott, C.Unverzagt, H.-U.Moesch, L.-O.Essen. Structural Basis of Flocculin-Mediated Social Behavior in Yeast Proc.Natl.Acad.Sci.Usa V. 107 22511 2010.
ISSN: ISSN 0027-8424
PubMed: 21149680
DOI: 10.1073/PNAS.1013210108
Page generated: Sat Jul 20 13:53:17 2024

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