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Chlorine in PDB 2xqh: Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd

Protein crystallography data

The structure of Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd, PDB code: 2xqh was solved by J.C.Leo, A.Lyskowski, M.Hartmann, H.Schwarz, D.Linke, A.N.Lupas, A.Goldman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.512 / 1.99
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 48.950, 48.950, 409.600, 90.00, 90.00, 120.00
R / Rfree (%) 15.85 / 18.55

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd (pdb code 2xqh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd, PDB code: 2xqh:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2xqh

Go back to Chlorine Binding Sites List in 2xqh
Chlorine binding site 1 out of 4 in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1418

b:39.4
occ:0.33
OD1 A:ASN414 3.1 44.2 1.0
CB A:ASN414 3.9 36.1 1.0
CG A:ASN414 3.9 43.0 1.0
CA A:ILE411 4.1 29.5 1.0
CG1 A:ILE411 4.2 27.7 1.0
CG2 A:ILE411 4.2 34.3 1.0
CB A:ILE411 4.4 29.1 1.0
O A:ILE411 4.7 41.0 1.0
C A:ILE411 5.0 41.8 1.0

Chlorine binding site 2 out of 4 in 2xqh

Go back to Chlorine Binding Sites List in 2xqh
Chlorine binding site 2 out of 4 in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1419

b:29.3
occ:0.33
OD1 A:ASN407 3.2 30.9 1.0
CB A:ASN407 3.8 24.8 1.0
CG A:ASN407 3.9 23.2 1.0
CA A:ILE404 4.2 23.4 1.0
CG1 A:ILE404 4.2 27.9 1.0
CB A:ILE404 4.5 23.3 1.0
CG2 A:ILE404 4.6 21.1 1.0
O A:ILE404 4.7 27.1 1.0
C A:ILE404 5.0 24.6 1.0

Chlorine binding site 3 out of 4 in 2xqh

Go back to Chlorine Binding Sites List in 2xqh
Chlorine binding site 3 out of 4 in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1420

b:23.2
occ:0.33
OD1 A:ASN400 3.1 25.0 1.0
CB A:ASN400 3.8 18.9 1.0
CG A:ASN400 3.8 25.5 1.0
CG2 A:VAL397 4.1 18.8 1.0
CG1 A:VAL397 4.2 20.3 1.0
CA A:VAL397 4.2 20.4 1.0
CB A:VAL397 4.4 18.3 1.0
O A:VAL397 4.8 24.9 1.0

Chlorine binding site 4 out of 4 in 2xqh

Go back to Chlorine Binding Sites List in 2xqh
Chlorine binding site 4 out of 4 in the Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An Immunoglobulin-Binding Fragment of the Trimeric Autotransporter Adhesin Eibd within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1421

b:58.6
occ:0.33
OG1 A:THR383 2.8 31.1 1.0
CG2 A:THR383 3.6 21.8 1.0
CB A:THR383 3.7 33.5 1.0
CA A:THR383 4.4 29.1 1.0
CD1 A:LEU379 4.9 28.7 1.0

Reference:

J.C.Leo, A.Lyskowski, K.Hattula, M.D.Hartmann, H.Schwarz, S.J.Butcher, D.Linke, A.N.Lupas, A.Goldman. The Structure of E. Coli Igg-Binding Protein D Suggests A General Model For Bending and Binding in Trimeric Autotransporter Adhesins. Structure V. 19 1021 2011.
ISSN: ISSN 0969-2126
PubMed: 21742268
DOI: 10.1016/J.STR.2011.03.021
Page generated: Sat Jul 20 14:07:44 2024

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