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Chlorine in PDB 2xxv: Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate

Protein crystallography data

The structure of Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate, PDB code: 2xxv was solved by N.Nayeem, O.Mayans, T.Green, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.94 / 1.70
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 96.260, 104.873, 113.589, 90.00, 90.00, 90.00
R / Rfree (%) 16.5 / 20.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate (pdb code 2xxv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate, PDB code: 2xxv:

Chlorine binding site 1 out of 1 in 2xxv

Go back to Chlorine Binding Sites List in 2xxv
Chlorine binding site 1 out of 1 in the Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the GLUK2 (GLUR6) M770K Lbd Dimer in Complex with Kainate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl901

b:24.1
occ:0.93
O A:HOH2244 2.9 29.9 1.0
O B:HOH2206 3.0 28.3 1.0
NZ A:LYS531 3.3 20.1 1.0
NZ B:LYS531 3.4 17.9 1.0
NH1 B:ARG775 3.4 33.2 1.0
NH1 A:ARG775 3.5 33.6 1.0
O A:HOH2109 3.8 44.3 1.0
CG A:LYS531 4.0 17.0 1.0
CG B:LYS531 4.1 23.5 1.0
O B:PHE529 4.1 18.6 1.0
CE B:LYS531 4.2 17.2 1.0
CE A:LYS531 4.2 22.7 1.0
O A:PHE529 4.2 16.7 1.0
CD A:ARG775 4.4 32.8 1.0
CD B:ARG775 4.5 28.2 1.0
CZ B:ARG775 4.6 29.6 1.0
CZ A:ARG775 4.7 39.3 1.0
CD A:LYS531 4.7 23.2 1.0
N B:LYS531 4.7 16.1 1.0
N A:LYS531 4.8 14.7 1.0
OG1 B:THR779 4.8 15.5 1.0
OG1 A:THR779 4.8 19.2 1.0
CD B:LYS531 4.8 22.9 1.0
OD1 A:ASP776 4.8 29.6 1.0
OD1 B:ASP776 4.9 29.3 1.0

Reference:

N.Nayeem, O.Mayans, T.Green. Conformational Flexibility of the Ligand-Binding Domain Dimer in Kainate Receptor Gating and Desensitization J.Neurosci. V. 31 2916 2011.
ISSN: ISSN 0270-6474
PubMed: 21414913
DOI: 10.1523/JNEUROSCI.4771-10.2011
Page generated: Sat Dec 12 09:27:14 2020

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