Chlorine in PDB 2y75: The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis

The structure of The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis, PDB code: 2y75 was solved by W.Shepard, O.Soutourina, E.Courtois, P.England, A.Haouz, I.Martin-Verstraete, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.84 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	98.700, 103.700, 106.530, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / 21.4

The binding sites of Chlorine atom in the The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis (pdb code 2y75). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis, PDB code: 2y75:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1132 b:43.0 occ:1.00 O B:HOH2048 3.0 34.1 1.0 N B:LEU29 3.3 27.5 1.0 O B:HOH2079 3.4 50.2 1.0 CA B:SER28 3.7 27.8 1.0 CE2 B:TYR66 3.8 27.5 1.0 O B:HOH2057 3.8 72.1 1.0 CD2 B:TYR66 4.0 26.6 1.0 C B:SER28 4.0 29.3 1.0 CA B:GLY65 4.1 29.0 1.0 CB B:SER28 4.1 30.7 1.0 CB B:LEU29 4.2 30.0 1.0 CA B:LEU29 4.3 28.2 1.0 CG B:LEU29 4.6 36.5 1.0 O B:THR27 4.8 27.5 1.0 O B:HOH2081 4.8 65.3 1.0 C B:GLY65 4.8 30.9 1.0 O B:HOH2090 4.8 49.9 1.0 CZ B:TYR66 4.9 33.7 1.0 N B:SER28 4.9 26.9 1.0 N B:TYR66 5.0 25.5 1.0 O B:HOH2080 5.0 42.2 0.5 N B:GLY65 5.0 31.1 1.0 OE2 B:GLU40 5.0 36.3 1.0

Chlorine binding site 2 out of 3 in the The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl1131 b:45.2 occ:1.00 O D:HOH2020 2.9 64.3 1.0 O D:HOH2064 2.9 38.7 1.0 O D:HOH2031 3.1 72.6 1.0 N D:LEU29 3.3 30.2 1.0 O D:HOH2087 3.5 44.1 1.0 CA D:SER28 3.7 28.7 1.0 CE2 D:TYR66 3.7 31.2 1.0 CD2 D:TYR66 3.9 29.2 1.0 CB D:SER28 4.0 29.8 1.0 C D:SER28 4.0 31.8 1.0 CB D:LEU29 4.0 31.1 1.0 CA D:GLY65 4.1 29.4 1.0 CA D:LEU29 4.3 29.9 1.0 O D:HOH2073 4.7 48.6 1.0 O D:THR27 4.7 33.0 1.0 O D:HOH2072 4.7 37.8 0.5 C D:GLY65 4.8 31.7 1.0 CG D:LEU29 4.8 38.1 1.0 CZ D:TYR66 4.9 35.9 1.0 O D:HOH2089 4.9 40.6 1.0 N D:SER28 4.9 30.0 1.0 N D:TYR66 4.9 28.2 1.0 N D:GLY65 4.9 31.2 1.0

Chlorine binding site 3 out of 3 in the The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of Cymr (Yrzc) the Global Cysteine Regulator of B. Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ F:Cl1133 b:38.0 occ:1.00 O F:HOH2010 2.9 58.7 1.0 O F:HOH2063 3.1 54.6 1.0 N F:LEU29 3.2 27.9 1.0 O F:HOH2051 3.2 29.6 1.0 O F:HOH2074 3.4 44.6 1.0 CA F:SER28 3.7 29.6 1.0 CE2 F:TYR66 3.8 30.2 1.0 CA F:GLY65 3.8 28.6 1.0 CD2 F:TYR66 3.9 29.2 1.0 C F:SER28 3.9 30.1 1.0 CB F:LEU29 4.0 29.6 1.0 CA F:LEU29 4.2 28.5 1.0 CB F:SER28 4.2 30.7 1.0 CG F:LEU29 4.4 35.6 1.0 C F:GLY65 4.6 31.1 1.0 N F:GLY65 4.7 29.3 1.0 O F:THR27 4.7 29.4 1.0 N F:TYR66 4.8 28.0 1.0 O F:HOH2153 4.9 55.0 1.0 N F:SER28 4.9 30.5 1.0 CZ F:TYR66 5.0 36.3 1.0 O F:HOH2052 5.0 50.5 1.0 N F:LYS30 5.0 27.9 1.0

W.Shepard, O.Soutourina, E.Courtois, P.England, A.Haouz, I.Martin-Verstraete. Insights Into the RRF2 Repressor Family - the Structure of Cymr, the Global Cysteine Regulator of Bacillus Subtilis. Febs J. V. 278 2689 2011.
ISSN: ISSN 1742-464X
PubMed: 21624051
DOI: 10.1111/J.1742-4658.2011.08195.X