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Chlorine in PDB 2yc4: Intraflagellar Transport Complex 25-27 From Chlamydomonas

Protein crystallography data

The structure of Intraflagellar Transport Complex 25-27 From Chlamydomonas, PDB code: 2yc4 was solved by S.Bhogaraju, M.Taschner, E.Lorentzen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.848 / 2.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.020, 68.300, 93.780, 90.00, 92.42, 90.00
R / Rfree (%) 22.54 / 31.58

Other elements in 2yc4:

The structure of Intraflagellar Transport Complex 25-27 From Chlamydomonas also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Intraflagellar Transport Complex 25-27 From Chlamydomonas (pdb code 2yc4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Intraflagellar Transport Complex 25-27 From Chlamydomonas, PDB code: 2yc4:

Chlorine binding site 1 out of 1 in 2yc4

Go back to Chlorine Binding Sites List in 2yc4
Chlorine binding site 1 out of 1 in the Intraflagellar Transport Complex 25-27 From Chlamydomonas


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Intraflagellar Transport Complex 25-27 From Chlamydomonas within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1204

b:79.7
occ:1.00
O D:ALA25 2.6 70.2 1.0
N D:LYS29 2.7 61.0 1.0
N D:GLY28 3.3 63.7 1.0
CA D:GLY28 3.3 52.3 1.0
C D:GLY28 3.4 57.8 1.0
N D:SER30 3.5 52.3 1.0
OG D:SER30 3.6 80.8 1.0
CA D:LYS29 3.6 48.7 1.0
C D:ALA25 3.7 78.2 1.0
CB D:LYS29 3.7 45.4 1.0
C D:LYS29 4.1 48.9 1.0
CG D:LYS29 4.2 52.6 1.0
CA D:ALA25 4.3 81.2 1.0
CB D:SER30 4.4 68.3 1.0
O D:GLU24 4.4 71.0 1.0
N D:VAL27 4.4 69.4 1.0
C D:VAL27 4.4 62.2 1.0
CE D:LYS29 4.5 54.6 1.0
O D:GLY28 4.6 47.9 1.0
CA D:SER30 4.6 49.5 1.0
N D:THR26 4.7 76.0 1.0
CD D:LYS29 5.0 49.8 1.0

Reference:

S.Bhogaraju, M.Taschner, M.Morawetz, C.Basquin, E.Lorentzen. Crystal Structure of the Intraflagellar Transport Complex 25/27. Embo J. V. 30 1907 2011.
ISSN: ISSN 0261-4189
PubMed: 21505417
DOI: 10.1038/EMBOJ.2011.110
Page generated: Sat Dec 12 09:28:35 2020

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