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Chlorine in PDB 2z3j: Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant

Enzymatic activity of Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant

All present enzymatic activity of Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant:
3.5.4.23;

Protein crystallography data

The structure of Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant, PDB code: 2z3j was solved by A.H.Teh, T.Kumasaka, M.Yamamoto, M.Furuichi, M.Nakasako, M.Kimura, I.Yamaguchi, T.Ueki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.81 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.802, 69.952, 145.844, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 21.4

Other elements in 2z3j:

The structure of Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant also contains other interesting chemical elements:

Arsenic (As) 4 atoms
Zinc (Zn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant (pdb code 2z3j). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant, PDB code: 2z3j:

Chlorine binding site 1 out of 1 in 2z3j

Go back to Chlorine Binding Sites List in 2z3j
Chlorine binding site 1 out of 1 in the Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Blasticidin S Deaminase (Bsd) R90K Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl3001

b:10.1
occ:1.00
NZ B:LYS90 3.2 8.8 1.0
NZ C:LYS90 3.3 9.6 1.0
NZ A:LYS90 3.3 9.0 1.0
NZ D:LYS90 3.3 8.6 1.0
O A:THR50 3.3 11.2 1.0
O C:THR50 3.4 10.5 1.0
O B:THR50 3.4 10.6 1.0
O D:THR50 3.4 11.2 1.0
CA B:GLY51 3.6 10.3 1.0
CA D:GLY51 3.6 11.7 1.0
CA C:GLY51 3.6 10.4 1.0
CA A:GLY51 3.6 10.3 1.0
O B:GLY51 4.1 9.6 1.0
O C:GLY51 4.2 10.2 1.0
O A:GLY51 4.2 9.6 1.0
C A:THR50 4.2 11.3 1.0
C C:THR50 4.2 10.2 1.0
C B:THR50 4.2 11.1 1.0
C D:THR50 4.2 11.8 1.0
O D:GLY51 4.3 10.2 1.0
N A:GLY51 4.3 10.5 1.0
N B:GLY51 4.3 10.0 1.0
N C:GLY51 4.4 9.8 1.0
N D:GLY51 4.4 11.0 1.0
C B:GLY51 4.4 10.8 1.0
C A:GLY51 4.4 10.3 1.0
C C:GLY51 4.4 9.7 1.0
C D:GLY51 4.5 10.6 1.0
CE C:LYS90 4.5 10.0 1.0
CE D:LYS90 4.5 9.8 1.0
CE B:LYS90 4.6 8.9 1.0
CE A:LYS90 4.6 10.1 1.0

Reference:

T.Kumasaka, M.Yamamoto, M.Furuichi, M.Nakasako, A.H.Teh, M.Kimura, I.Yamaguchi, T.Ueki. Crystal Structures of Blasticidin S Deaminase (Bsd): Implications For Dynamic Properties of Catalytic Zinc J.Biol.Chem. V. 282 37103 2007.
ISSN: ISSN 0021-9258
PubMed: 17959604
DOI: 10.1074/JBC.M704476200
Page generated: Sat Jul 20 15:25:19 2024

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