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Chlorine in PDB 2z4q: Crystal Structure of A Murine Antibody Fab 528

Protein crystallography data

The structure of Crystal Structure of A Murine Antibody Fab 528, PDB code: 2z4q was solved by T.Nakanishi, K.Tsumoto, R.Asano, H.Kondo, I.Kumagai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.95 / 2.30
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 126.600, 126.600, 68.278, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 22.8

Other elements in 2z4q:

The structure of Crystal Structure of A Murine Antibody Fab 528 also contains other interesting chemical elements:

Cadmium (Cd) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Murine Antibody Fab 528 (pdb code 2z4q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Murine Antibody Fab 528, PDB code: 2z4q:

Chlorine binding site 1 out of 1 in 2z4q

Go back to Chlorine Binding Sites List in 2z4q
Chlorine binding site 1 out of 1 in the Crystal Structure of A Murine Antibody Fab 528


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Murine Antibody Fab 528 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2001

b:63.5
occ:1.00
OG1 A:THR187 3.4 26.7 1.0
NH2 A:ARG193 3.6 43.1 1.0
NH1 A:ARG193 4.2 44.3 1.0
CB A:ASP189 4.2 33.0 1.0
CB A:THR187 4.3 28.3 1.0
CG2 A:THR187 4.4 28.4 1.0
CZ A:ARG193 4.4 43.2 1.0
N A:GLU190 4.6 28.4 1.0
OD2 A:ASP189 4.7 40.5 1.0
CB A:GLU190 5.0 32.5 1.0

Reference:

K.Makabe, T.Nakanishi, K.Tsumoto, Y.Tanaka, H.Kondo, M.Umetsu, Y.Sone, R.Asano, I.Kumagai. Thermodynamic Consequences of Mutations in Vernier Zone Residues of A Humanized Anti-Human Epidermal Growth Factor Receptor Murine Antibody, 528 J.Biol.Chem. V. 283 1156 2008.
ISSN: ISSN 0021-9258
PubMed: 17947238
DOI: 10.1074/JBC.M706190200
Page generated: Sat Jul 20 15:26:15 2024

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