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Chlorine in PDB 3aee: Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5

Enzymatic activity of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5

All present enzymatic activity of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5:
1.3.5.1;

Protein crystallography data

The structure of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5, PDB code: 3aee was solved by S.Harada, T.Sasaki, M.Shindo, Y.Kido, D.K.Inaoka, J.Omori, A.Osanai, K.Sakamoto, J.Mao, S.Matsuoka, M.Inoue, T.Honma, A.Tanaka, K.Kita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.96 / 3.22
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 70.751, 83.841, 293.735, 90.00, 90.00, 90.00
R / Rfree (%) 23.2 / 28.2

Other elements in 3aee:

The structure of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5 also contains other interesting chemical elements:

Iron (Fe) 10 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5 (pdb code 3aee). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5, PDB code: 3aee:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3aee

Go back to Chlorine Binding Sites List in 3aee
Chlorine binding site 1 out of 2 in the Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1201

b:86.9
occ:0.60
CL12 C:AT51201 0.0 86.9 0.6
C13 C:AT51201 1.8 87.0 0.6
C12 C:AT51201 2.7 86.2 1.0
C14 C:AT51201 2.7 87.5 0.6
C11 C:AT51201 3.0 84.9 1.0
C17 C:AT51201 3.2 86.2 1.0
OH D:TYR91 3.6 97.0 1.0
CL16 C:AT51201 3.9 88.7 0.6
O1 C:AT51201 4.0 80.6 1.0
CZ D:TYR91 4.1 95.3 1.0
C8 C:AT51201 4.2 83.2 1.0
CE1 D:TYR91 4.6 94.0 1.0
C1 C:AT51201 4.7 80.8 1.0
CE2 D:TYR91 4.8 96.5 1.0
C7 C:AT51201 4.8 81.5 1.0

Chlorine binding site 2 out of 2 in 3aee

Go back to Chlorine Binding Sites List in 3aee
Chlorine binding site 2 out of 2 in the Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1201

b:88.7
occ:0.60
CL16 C:AT51201 0.0 88.7 0.6
C14 C:AT51201 1.8 87.5 0.6
C13 C:AT51201 2.7 87.0 0.6
CA C:ILE43 3.5 91.6 1.0
CB C:ILE43 3.6 92.8 1.0
O C:ILE43 3.7 91.3 1.0
CB C:ARG46 3.8 85.6 1.0
OH D:TYR91 3.8 97.0 1.0
CL12 C:AT51201 3.9 86.9 0.6
C12 C:AT51201 3.9 86.2 1.0
CG2 C:ILE43 4.0 91.9 1.0
C C:ILE43 4.1 92.0 1.0
CG C:ARG46 4.4 84.9 1.0
CD C:ARG46 4.4 85.3 1.0
C6 C:AT51201 4.6 80.6 1.0
C1 C:AT51201 4.6 80.8 1.0
N C:ILE43 4.7 92.0 1.0
C17 C:AT51201 4.7 86.2 1.0
C5 C:AT51201 4.8 80.0 1.0
N C:GLY47 4.9 87.8 1.0
C2 C:AT51201 4.9 80.3 1.0
C7 C:AT51201 5.0 81.5 1.0
CZ D:TYR91 5.0 95.3 1.0

Reference:

S.Harada, T.Sasaki, M.Shindo, Y.Kido, D.K.Inaoka, J.Omori, A.Osanai, K.Sakamoto, J.Mao, S.Matsuoka, M.Inoue, T.Honma, A.Tanaka, K.Kita. Crystal Structure of Porcine Heart Mitochondrial Complex II Bound with Atpenin A5 To Be Published.
Page generated: Sat Dec 12 09:31:18 2020

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