Chlorine in PDB 3aei: Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1

The structure of Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1, PDB code: 3aei was solved by A.Ohtaki, Y.Sugano, T.Sato, K.Noguchi, H.Miyatake, M.Yohda, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.66 / 1.70
Space group	P 4 21 2
Cell size a, b, c (Å), α, β, γ (°)	67.315, 67.315, 92.415, 90.00, 90.00, 90.00
R / Rfree (%)	21 / 24

The binding sites of Chlorine atom in the Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1 (pdb code 3aei). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1, PDB code: 3aei:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl101 b:1.3 occ:0.25 OH A:TYR47 3.1 18.7 1.0 CD A:ARG45 3.9 38.4 1.0 CZ A:TYR47 4.0 17.3 1.0 CE2 A:TYR47 4.2 16.9 1.0 NE A:ARG45 4.3 49.1 1.0 CZ A:ARG45 5.0 56.1 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl102 b:1.3 occ:0.25 OH B:TYR47 3.1 16.3 1.0 CZ B:TYR47 4.1 14.7 1.0 CE2 B:TYR47 4.2 17.1 1.0 NE B:ARG45 4.2 47.5 1.0 CD B:ARG45 4.3 35.4 1.0 CZ B:ARG45 4.9 51.9 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Prefoldin BETA2 Subunit From Thermococcus Strain Ks-1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl103 b:38.5 occ:0.83 OE2 B:GLU12 2.6 38.3 1.0 O A:HOH159 2.6 53.8 1.0 OE2 B:GLU8 2.6 31.0 1.0 CG B:GLU8 3.4 29.6 1.0 CD B:GLU8 3.4 37.5 1.0 CD B:GLU12 3.5 45.4 1.0 CB B:GLU12 3.8 21.5 1.0 O B:GLU8 4.0 21.2 1.0 CD2 A:LEU80 4.0 24.0 1.0 CG B:GLU12 4.1 33.8 1.0 CD1 A:LEU80 4.2 22.1 1.0 CG A:LEU80 4.2 25.5 1.0 OE1 B:GLU12 4.5 36.8 1.0 C B:GLU8 4.5 19.3 1.0 CB A:GLU76 4.6 22.7 1.0 OE1 B:GLU8 4.6 38.0 1.0 CG A:GLU76 4.7 31.8 1.0 CD2 B:LEU9 4.7 25.1 1.0 CB B:GLU8 4.8 22.8 1.0 CA B:LEU9 4.8 15.2 1.0 N B:LEU9 4.8 19.7 1.0 O A:GLU76 5.0 26.0 1.0 CD A:GLU76 5.0 43.1 1.0

M.Sahlan, T.Zako, P.T.Tai, A.Ohtaki, K.Noguchi, M.Maeda, H.Miyatake, N.Dohmae, M.Yohda. Thermodynamic Characterization of the Interaction Between Prefoldin and Group II Chaperonin J.Mol.Biol. V. 399 628 2010.
ISSN: ISSN 0022-2836
PubMed: 20434454
DOI: 10.1016/J.JMB.2010.04.046