Chlorine in PDB 3ap7: Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid

The structure of Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid, PDB code: 3ap7 was solved by T.Matsuzaka, H.Ideo, K.Yamashita, T.Nonaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.96 / 1.53
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	46.360, 49.917, 70.289, 90.00, 90.00, 90.00
R / Rfree (%)	16.4 / 18.8

The binding sites of Chlorine atom in the Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid (pdb code 3ap7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid, PDB code: 3ap7:

Chlorine binding site 1 out of 1 in the Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Galectin-8 N-Terminal Carbohydrate Recognition Domain in Complex with Lactose Sialic Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl157 b:22.6 occ:1.00 N A:ASP112 3.1 14.4 1.0 CB A:ASP112 3.5 15.5 1.0 CB A:LEU110 3.7 12.6 1.0 N A:LYS111 3.7 13.9 1.0 CE A:LYS113 3.7 20.6 1.0 CA A:ASP112 3.8 14.7 1.0 CG A:LYS113 4.0 13.0 1.0 N A:LYS113 4.0 12.6 1.0 C A:LYS111 4.1 14.2 1.0 CA A:LYS111 4.2 14.9 1.0 CG A:ASP112 4.2 19.1 1.0 CB A:LYS111 4.2 15.7 1.0 C A:ASP112 4.2 13.6 1.0 CD A:LYS113 4.3 16.8 1.0 C A:LEU110 4.3 13.4 1.0 OD2 A:ASP112 4.5 26.2 1.0 NZ A:LYS113 4.5 25.1 1.0 CD1 A:LEU110 4.5 14.3 1.0 CA A:LEU110 4.7 13.0 1.0 O A:HOH248 4.7 16.5 1.0 CG A:LEU110 4.7 12.7 1.0 CB A:LYS113 4.8 12.5 1.0 OD1 A:ASP112 5.0 22.7 1.0 CA A:LYS113 5.0 11.7 1.0

H.Ideo, T.Matsuzaka, T.Nonaka, A.Seko, K.Yamashita. Galectin-8-N-Domain Recognition Mechanism For Sialylated and Sulfated Glycans J.Biol.Chem. V. 286 11346 2011.
ISSN: ISSN 0021-9258
PubMed: 21288902
DOI: 10.1074/JBC.M110.195925