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Chlorine in PDB 3awh: E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F)

Protein crystallography data

The structure of E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F), PDB code: 3awh was solved by S.Sato, T.Nakanishi, H.Inoue, M.Kitamura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.990, 60.865, 71.938, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 20.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F) (pdb code 3awh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F), PDB code: 3awh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3awh

Go back to Chlorine Binding Sites List in 3awh
Chlorine binding site 1 out of 2 in the E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2002

b:15.6
occ:1.00
OG A:SER34 3.0 18.8 1.0
NH2 B:ARG71 3.2 26.8 1.0
NE B:ARG71 3.3 28.7 1.0
N A:SER34 3.3 14.8 1.0
N A:GLY14 3.3 16.5 1.0
CA A:LYS13 3.5 18.6 1.0
CB A:SER34 3.6 15.6 1.0
N A:ASN33 3.6 13.2 1.0
CZ B:ARG71 3.6 29.2 1.0
CB A:TRP32 3.7 14.1 1.0
O A:GLY14 3.7 14.4 1.0
CB A:LYS13 3.8 20.0 1.0
CB A:ASN33 3.9 13.8 1.0
C A:LYS13 3.9 17.5 1.0
CG A:LYS13 4.0 22.9 1.0
CA A:SER34 4.1 15.6 1.0
CA A:ASN33 4.1 13.7 1.0
C A:TRP32 4.2 13.7 1.0
CE3 A:TRP32 4.2 16.5 1.0
C A:ASN33 4.2 13.9 1.0
CA A:TRP32 4.3 13.7 1.0
CG B:ARG71 4.4 22.1 1.0
CD B:ARG71 4.4 26.2 1.0
CG A:TRP32 4.4 15.0 1.0
CA A:GLY14 4.5 15.3 1.0
C A:GLY14 4.5 14.9 1.0
CD2 A:TRP32 4.6 15.7 1.0
O A:ASN12 4.6 19.4 1.0
N A:LYS13 4.7 18.4 1.0
CD A:LYS13 4.7 28.9 1.0
CG A:ASN33 4.8 16.0 1.0
NH1 B:ARG71 4.9 30.6 1.0

Chlorine binding site 2 out of 2 in 3awh

Go back to Chlorine Binding Sites List in 3awh
Chlorine binding site 2 out of 2 in the E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2001

b:17.9
occ:1.00
NE A:ARG71 3.2 22.8 1.0
N B:SER34 3.3 15.9 1.0
NH2 A:ARG71 3.4 24.4 1.0
OG B:SER34 3.4 18.6 1.0
N B:GLY14 3.4 17.3 1.0
CA B:LYS13 3.6 19.9 1.0
CB B:SER34 3.7 16.7 1.0
N B:ASN33 3.7 14.4 1.0
O B:GLY14 3.7 15.2 1.0
CZ A:ARG71 3.7 23.1 1.0
CB B:TRP32 3.8 14.1 1.0
CB B:ASN33 4.0 15.7 1.0
C B:LYS13 4.0 18.6 1.0
CB B:LYS13 4.1 20.9 1.0
O B:HOH1086 4.1 32.4 1.0
CA B:SER34 4.1 16.7 1.0
CA B:ASN33 4.2 15.3 1.0
C B:ASN33 4.2 15.3 1.0
CG B:LYS13 4.3 23.5 1.0
C B:TRP32 4.3 14.4 1.0
CG A:ARG71 4.3 19.4 1.0
CE3 B:TRP32 4.3 13.8 1.0
CD A:ARG71 4.3 21.7 1.0
O B:ASN12 4.4 20.8 1.0
CA B:TRP32 4.5 14.2 1.0
CG B:TRP32 4.5 13.0 1.0
CA B:GLY14 4.6 16.3 1.0
C B:GLY14 4.6 15.1 1.0
CD2 B:TRP32 4.7 14.4 1.0
N B:LYS13 4.7 20.4 1.0
CG B:ASN33 4.9 16.9 1.0
C B:ASN12 5.0 20.9 1.0

Reference:

S.Sato, T.Nakanishi, H.Inoue, M.Kitamura. Crystal Structure of E13K Mutant of Fmn-Binding Protein From Desulfovibrio Vulgaris (Miyazaki F) To Be Published.
Page generated: Sat Dec 12 09:32:09 2020

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