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Chlorine in PDB 3bbj: Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution, PDB code: 3bbj was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.39 / 2.16
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 99.818, 103.654, 54.734, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 24.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution (pdb code 3bbj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution, PDB code: 3bbj:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 3bbj

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Chlorine binding site 1 out of 4 in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl273

b:74.1
occ:1.00
N A:ARG82 3.5 58.0 1.0
NH2 B:ARG66 3.6 57.0 1.0
CA A:LYS81 3.9 55.1 1.0
C A:LYS81 4.2 56.1 1.0
CB A:ARG82 4.2 61.4 1.0
CD A:LYS81 4.3 57.5 1.0
O A:ARG82 4.3 58.4 1.0
CA A:ARG82 4.4 61.0 1.0
CG A:LYS81 4.5 55.2 1.0
O A:LEU80 4.6 54.4 1.0
N A:LYS81 4.7 55.0 1.0
CB A:LYS81 4.8 56.3 1.0
CZ B:ARG66 4.8 56.7 1.0
O4 B:SO4273 4.8 60.8 0.5
C A:ARG82 4.9 58.5 1.0

Chlorine binding site 2 out of 4 in 3bbj

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Chlorine binding site 2 out of 4 in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl274

b:81.5
occ:1.00
O A:ILE31 3.4 54.2 1.0
N A:THR33 3.6 53.8 1.0
CA A:GLY32 3.8 52.5 1.0
N A:ALA34 3.9 51.9 1.0
C A:ILE31 4.0 52.4 1.0
C A:GLY32 4.1 52.9 1.0
CG1 A:ILE31 4.2 55.1 1.0
OG1 A:THR33 4.2 49.7 1.0
N A:GLY32 4.2 53.1 1.0
CH2 A:TRP213 4.2 52.4 0.5
CZ3 A:TRP213 4.3 52.6 0.5
CB A:ALA34 4.3 47.5 1.0
CH2 A:TRP213 4.3 40.7 0.5
CZ3 A:TRP213 4.5 45.1 0.5
CA A:THR33 4.6 53.2 1.0
CD1 A:ILE31 4.6 51.8 1.0
CZ2 A:TRP213 4.6 43.2 0.5
CA A:ALA34 4.6 50.2 1.0
C A:THR33 4.7 53.5 1.0
CZ2 A:TRP213 4.7 51.2 0.5
CE3 A:TRP213 4.8 53.8 0.5
O A:ALA34 4.8 48.0 1.0
CE3 A:TRP213 4.9 45.1 0.5
CE2 A:TRP213 5.0 43.3 0.5

Chlorine binding site 3 out of 4 in 3bbj

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Chlorine binding site 3 out of 4 in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl275

b:89.7
occ:1.00
C2 A:EDO276 3.2 78.0 1.0
C1 A:EDO276 3.4 78.5 1.0
NZ A:LYS81 3.5 53.2 1.0
O1 A:EDO276 3.6 72.3 1.0
N A:ARG84 3.6 55.9 1.0
CA A:GLY83 3.7 57.0 1.0
C A:GLY83 4.2 56.3 1.0
O2 A:EDO276 4.5 74.2 1.0
CB A:ARG84 4.6 55.2 1.0
CA A:ARG84 4.7 56.3 1.0
O A:ARG82 4.7 58.4 1.0
CE A:LYS81 5.0 55.6 1.0

Chlorine binding site 4 out of 4 in 3bbj

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Chlorine binding site 4 out of 4 in the Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Thioesterase II (TFU_2367) From Thermobifida Fusca Yx at 2.45 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl274

b:77.0
occ:1.00
N B:ARG82 3.6 58.2 1.0
NH2 A:ARG66 4.0 55.7 1.0
CA B:LYS81 4.1 55.0 1.0
CB B:ARG82 4.3 61.7 1.0
C B:LYS81 4.3 56.1 1.0
CD B:LYS81 4.5 58.1 1.0
CA B:ARG82 4.5 61.0 1.0
O B:LEU80 4.5 54.3 1.0
O B:ARG82 4.5 58.2 1.0
O3 A:SO4272 4.6 58.9 0.5
N B:LYS81 4.8 55.1 1.0
C B:LEU80 5.0 55.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 03:24:47 2025

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