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Chlorine in PDB 3blj: Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment

Enzymatic activity of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment

All present enzymatic activity of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment:
2.4.2.30;

Protein crystallography data

The structure of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment, PDB code: 3blj was solved by T.Karlberg, L.Lehtio, C.H.Arrowsmith, H.Berglund, R.D.Busam, R.Collins, L.G.Dahlgren, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Johansson, A.Kallas, T.Kotenyova, M.Moche, M.E.Nilsson, P.Nordlund, T.Nyman, C.Persson, J.Sagemark, L.Svensson, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, M.Welin, J.Weigelt, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.78 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.210, 68.120, 158.280, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 24.3

Other elements in 3blj:

The structure of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment (pdb code 3blj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment, PDB code: 3blj:

Chlorine binding site 1 out of 1 in 3blj

Go back to Chlorine Binding Sites List in 3blj
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl703

b:28.3
occ:1.00
 O A:HOH884 2.9 36.2 1.0
N A:GLY538 3.3 15.6 1.0
OG A:SER577 3.3 16.1 1.0
CB A:SER577 3.7 17.2 1.0
CA A:SER577 3.7 17.9 1.0
CA A:HIS537 3.9 15.2 1.0
CB A:TYR582 3.9 27.1 1.0
CG A:TYR582 4.0 28.7 1.0
C A:HIS537 4.1 14.6 1.0
CD2 A:TYR576 4.2 31.5 1.0
CA A:GLY538 4.2 16.9 1.0
O A:HOH891 4.2 35.1 1.0
CD2 A:TYR582 4.3 27.8 1.0
CE2 A:TYR576 4.3 36.3 1.0
O A:PHE536 4.4 13.2 1.0
N A:SER577 4.4 18.0 1.0
O A:GLY538 4.4 18.7 1.0
ND1 A:HIS537 4.5 21.1 1.0
CD1 A:TYR582 4.5 33.2 1.0
CG A:HIS537 4.6 17.8 1.0
N A:HIS537 4.7 14.4 1.0
O A:TYR569 4.7 14.5 1.0
CB A:ALA571 4.8 14.4 1.0
CB A:HIS537 4.8 15.1 1.0
C A:GLY538 4.8 18.1 1.0
C A:PHE536 4.8 13.7 1.0
C A:SER577 4.9 19.6 1.0
CE1 A:HIS537 4.9 21.7 1.0
O A:SER577 4.9 18.3 1.0
C A:TYR576 5.0 18.6 1.0
CE2 A:TYR582 5.0 31.3 1.0

Reference:

T.Karlberg, M.Klepsch, A.G.Thorsell, C.D.Andersson, A.Linusson, H.Schuler. Structural Basis For Lack of Adp-Ribosyltransferase Activity in Poly(Adp-Ribose) Polymerase-13/Zinc Finger Antiviral Protein. J.Biol.Chem. V. 290 7336 2015.
ISSN: ISSN 0021-9258
PubMed: 25635049
DOI: 10.1074/JBC.M114.630160
Page generated: Sat Dec 12 09:33:36 2020

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