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Chlorine in PDB 3bwv: Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution

Protein crystallography data

The structure of Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution, PDB code: 3bwv was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.24 / 1.55
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 39.310, 40.270, 55.310, 71.93, 75.08, 83.62
R / Rfree (%) 18.2 / 22.3

Other elements in 3bwv:

The structure of Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution (pdb code 3bwv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution, PDB code: 3bwv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3bwv

Go back to Chlorine Binding Sites List in 3bwv
Chlorine binding site 1 out of 2 in the Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:34.2
occ:1.00
CE2 B:PHE99 3.7 34.6 1.0
CG B:TYR103 3.9 24.3 1.0
CD2 B:PHE99 3.9 34.0 1.0
CD2 B:TYR103 4.0 29.2 1.0
CB B:TYR103 4.0 22.5 1.0
O B:HOH303 4.3 47.9 1.0
CA B:HIS100 4.6 24.5 1.0
CD1 B:TYR103 4.6 28.7 1.0
CE2 B:TYR103 4.6 31.2 1.0
CZ B:PHE99 4.7 34.0 1.0
ND1 B:HIS100 4.7 38.0 1.0
O B:PHE99 4.7 25.7 1.0
N B:HIS100 5.0 25.4 1.0

Chlorine binding site 2 out of 2 in 3bwv

Go back to Chlorine Binding Sites List in 3bwv
Chlorine binding site 2 out of 2 in the Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Deoxyribonucleotidase-Like Protein (NP_764060.1) From Staphylococcus Epidermidis Atcc 12228 at 1.55 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:70.3
occ:1.00
O B:GLU141 3.7 20.6 1.0
O B:PHE143 4.0 19.5 1.0
O B:ILE142 4.2 19.6 1.0
C B:ILE142 4.5 18.5 1.0
O B:HOH367 4.5 50.4 1.0
CA B:ILE142 4.6 19.0 1.0
O B:HOH318 4.6 38.3 1.0
C B:GLU141 4.7 21.4 1.0
C B:PHE143 4.7 19.6 1.0
CG B:GLU144 4.9 23.9 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Jul 20 16:40:38 2024

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