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Chlorine in PDB 3c7n: Structure of the HSP110:HSC70 Nucleotide Exchange Complex

Protein crystallography data

The structure of Structure of the HSP110:HSC70 Nucleotide Exchange Complex, PDB code: 3c7n was solved by J.P.Schuermann, J.Jiang, P.J.Hart, R.Sousa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.38 / 3.12
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 123.533, 169.501, 87.724, 90.00, 90.00, 90.00
R / Rfree (%) 22.4 / 28.3

Other elements in 3c7n:

The structure of Structure of the HSP110:HSC70 Nucleotide Exchange Complex also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the HSP110:HSC70 Nucleotide Exchange Complex (pdb code 3c7n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of the HSP110:HSC70 Nucleotide Exchange Complex, PDB code: 3c7n:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 3c7n

Go back to Chlorine Binding Sites List in 3c7n
Chlorine binding site 1 out of 3 in the Structure of the HSP110:HSC70 Nucleotide Exchange Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the HSP110:HSC70 Nucleotide Exchange Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl555

b:69.1
occ:1.00
CB B:ALA191 3.0 73.8 1.0
NH1 B:ARG193 3.4 48.1 1.0
O B:GLU192 3.8 76.6 1.0
CE1 B:HIS332 4.0 55.5 1.0
NE2 B:HIS332 4.1 56.1 1.0
ND1 B:HIS332 4.2 55.9 1.0
CG B:ARG193 4.3 51.2 1.0
CA B:ALA191 4.3 73.9 1.0
CD2 B:HIS332 4.3 55.2 1.0
CG B:HIS332 4.4 54.8 1.0
O B:GLY190 4.4 86.9 1.0
CZ B:ARG193 4.5 48.7 1.0
C B:GLU192 4.5 76.5 1.0
C B:ALA191 4.6 74.1 1.0
N B:GLU192 4.6 77.2 1.0
O B:VAL189 4.9 49.1 1.0

Chlorine binding site 2 out of 3 in 3c7n

Go back to Chlorine Binding Sites List in 3c7n
Chlorine binding site 2 out of 3 in the Structure of the HSP110:HSC70 Nucleotide Exchange Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the HSP110:HSC70 Nucleotide Exchange Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl556

b:65.8
occ:1.00
NE B:ARG236 3.0 22.4 1.0
NH2 B:ARG236 3.4 22.9 1.0
CZ B:ARG236 3.6 22.8 1.0
CD B:ARG236 4.1 23.2 1.0
CB B:ASN235 4.2 38.0 1.0
CG B:ARG236 4.5 24.5 1.0
O B:ASP232 4.6 32.6 1.0
ND2 B:ASN239 4.7 34.4 1.0
N B:ARG236 4.7 26.2 1.0
OD1 B:ASP232 4.8 31.5 1.0
NH1 B:ARG236 4.9 23.0 1.0

Chlorine binding site 3 out of 3 in 3c7n

Go back to Chlorine Binding Sites List in 3c7n
Chlorine binding site 3 out of 3 in the Structure of the HSP110:HSC70 Nucleotide Exchange Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of the HSP110:HSC70 Nucleotide Exchange Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl557

b:48.4
occ:1.00
NE B:ARG342 3.6 31.9 1.0
NH2 B:ARG342 3.8 32.2 1.0
CG2 A:VAL28 3.9 31.6 1.0
CZ B:ARG342 4.1 31.2 1.0
OD1 B:ASN364 4.3 25.3 1.0
CD B:PRO365 4.4 34.8 1.0
CD B:ARG342 4.5 33.0 1.0
CA B:ASN364 4.5 26.9 1.0
O B:SER362 4.9 34.7 1.0
CB B:ASN364 4.9 26.8 1.0
N B:ASN364 5.0 27.0 1.0
CG B:ASN364 5.0 26.1 1.0

Reference:

J.P.Schuermann, J.Jiang, J.Cuellar, O.Llorca, L.Wang, L.E.Gimenez, S.Jin, A.B.Taylor, B.Demeler, K.A.Morano, P.J.Hart, J.M.Valpuesta, E.M.Lafer, R.Sousa. Structure of the HSP110:HSC70 Nucleotide Exchange Machine Mol.Cell V. 31 232 2008.
ISSN: ISSN 1097-2765
PubMed: 18550409
DOI: 10.1016/J.MOLCEL.2008.05.006
Page generated: Sat Jul 20 16:54:43 2024

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