Chlorine in PDB 3c8v: Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution

The structure of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution, PDB code: 3c8v was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.06 / 2.28
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	249.617, 249.617, 104.900, 90.00, 90.00, 120.00
R / Rfree (%)	18 / 22.3

The structure of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution (pdb code 3c8v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 12 binding sites of Chlorine where determined in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution, PDB code: 3c8v:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl478 b:71.0 occ:1.00 OH A:TYR39 3.6 56.4 1.0 CD A:ARG32 3.6 58.9 1.0 NH1 A:ARG32 3.6 62.8 1.0 CE1 A:TYR39 4.0 53.9 1.0 CD2 A:TYR80 4.0 42.0 1.0 O A:HOH595 4.1 47.2 1.0 CE2 A:TYR80 4.2 41.4 1.0 CZ A:TYR39 4.2 54.6 1.0 CG A:TYR80 4.2 40.3 1.0 CZ A:TYR80 4.5 42.2 1.0 CD2 A:HIS38 4.5 55.4 1.0 CZ A:ARG32 4.5 62.6 1.0 CD1 A:TYR80 4.5 38.2 1.0 NE A:ARG32 4.5 59.4 1.0 ND2 A:ASN119 4.6 34.4 1.0 CG A:ARG32 4.7 60.1 1.0 CE1 A:TYR80 4.7 39.4 1.0 CZ A:PHE117 4.7 40.4 1.0 CB A:TYR80 4.8 38.1 1.0 NE2 A:HIS38 4.9 56.9 1.0

Chlorine binding site 2 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl479 b:33.7 occ:1.00 O A:HOH524 2.9 34.0 1.0 O A:HOH507 3.0 29.6 1.0 N A:TYR177 3.4 41.8 1.0 NE A:ARG176 3.4 47.6 1.0 CB A:ARG176 3.5 40.1 1.0 CE2 A:PHE158 3.7 38.4 1.0 CD2 A:TYR177 3.7 43.0 1.0 CA A:ARG176 3.7 38.9 1.0 CG A:ARG176 3.9 39.9 1.0 C A:ARG176 4.1 40.4 1.0 NH2 A:ARG176 4.1 48.7 1.0 CZ A:PHE158 4.2 41.4 1.0 CZ A:ARG176 4.2 50.3 1.0 CD A:ARG176 4.3 46.7 1.0 CB A:TYR177 4.3 40.6 1.0 CA A:GLY160 4.3 37.1 1.0 CA A:TYR177 4.4 40.6 1.0 OH A:TYR29 4.4 46.6 1.0 CG A:TYR177 4.5 37.9 1.0 CE1 A:TYR29 4.6 43.9 1.0 CE2 A:TYR177 4.6 40.9 1.0 CD2 A:PHE158 4.8 44.8 1.0 CZ A:TYR29 4.8 47.7 1.0 O A:GLN221 4.8 47.3 1.0

Chlorine binding site 3 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl480 b:67.2 occ:1.00 O D:HOH522 3.3 38.5 1.0 CD A:PRO130 4.0 40.6 1.0 OD1 A:ASP129 4.1 46.6 1.0 CG A:ASP129 4.1 46.5 1.0 NH2 D:ARG20 4.2 52.6 1.0 O A:HOH583 4.3 44.8 1.0 O A:GLY184 4.3 43.8 1.0 O A:HIS128 4.3 44.2 1.0 OD2 A:ASP129 4.4 54.3 1.0 CA A:ASP129 4.4 42.5 1.0 O D:HOH491 4.4 23.1 1.0 O A:HOH492 4.5 21.1 1.0 OG1 A:THR169 4.5 43.2 1.0 CB A:ASP129 4.6 45.4 1.0 CG A:PRO130 4.8 38.2 1.0 N A:PRO130 5.0 38.4 1.0

Chlorine binding site 4 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl478 b:43.7 occ:1.00 O B:HOH496 2.8 35.8 1.0 N B:TYR177 3.5 40.2 1.0 NE B:ARG176 3.6 49.1 1.0 CD2 B:TYR177 3.6 42.1 1.0 CE2 B:PHE158 3.7 39.9 1.0 CB B:ARG176 3.8 38.9 1.0 CA B:ARG176 3.9 39.2 1.0 CG B:ARG176 4.1 41.5 1.0 C B:ARG176 4.1 39.7 1.0 CZ B:PHE158 4.2 41.9 1.0 CB B:TYR177 4.2 40.5 1.0 CA B:GLY160 4.2 38.1 1.0 NH2 B:ARG176 4.3 50.4 1.0 CA B:TYR177 4.4 40.1 1.0 CZ B:ARG176 4.4 50.5 1.0 CG B:TYR177 4.4 39.1 1.0 CD B:ARG176 4.4 46.8 1.0 CE2 B:TYR177 4.5 37.1 1.0 OH B:TYR29 4.6 48.6 1.0 O B:GLN221 4.7 46.4 1.0 CE1 B:TYR29 4.7 43.0 1.0 CD2 B:PHE158 4.8 43.4 1.0 N B:SER161 4.9 39.1 1.0 NE2 B:GLN221 4.9 44.4 1.0 CZ B:TYR29 5.0 47.0 1.0

Chlorine binding site 5 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl479 b:68.0 occ:1.00 OD2 B:ASP83 3.4 58.6 0.5 ND2 B:ASN301 3.7 52.3 1.0 O B:LYS120 3.7 40.4 1.0 C B:LYS120 4.0 41.2 1.0 CG B:ASP83 4.1 43.4 0.5 OD1 B:ASN301 4.2 61.1 1.0 NH1 B:ARG284 4.2 99.2 1.0 O B:THR121 4.2 44.1 1.0 O B:LYS81 4.2 44.3 1.0 O B:HOH571 4.3 52.5 1.0 CG B:ASN301 4.3 57.8 1.0 C B:THR121 4.3 43.3 1.0 CA B:LYS120 4.4 41.3 1.0 N B:THR121 4.5 40.2 1.0 N B:LEU122 4.6 42.9 1.0 CB B:ASP83 4.6 42.5 0.5 CB B:ASP83 4.6 44.2 0.5 CD1 B:TYR146 4.7 46.1 1.0 N B:ASP83 4.7 42.6 1.0 CB B:LEU122 4.8 41.7 1.0 CE1 B:TYR146 4.8 50.0 1.0 CB B:LYS120 4.8 41.2 1.0 CA B:THR121 4.8 40.5 1.0 CA B:LEU122 4.9 42.3 1.0 CA B:SER82 4.9 39.2 1.0 OD1 B:ASP83 5.0 50.3 0.5

Chlorine binding site 6 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl480 b:74.4 occ:1.00 CD B:ARG32 3.6 57.6 1.0 O1 B:EDO487 3.6 78.8 1.0 NH1 B:ARG32 3.7 62.7 1.0 OH B:TYR39 3.8 55.0 1.0 CE1 B:TYR39 4.2 52.1 1.0 CD2 B:TYR80 4.3 41.7 1.0 CE2 B:TYR80 4.3 40.2 1.0 C1 B:EDO487 4.4 74.9 1.0 CZ B:TYR39 4.4 54.9 1.0 CG B:TYR80 4.5 41.4 1.0 CZ B:TYR80 4.5 40.5 1.0 NE B:ARG32 4.6 60.0 1.0 CG B:ARG32 4.6 60.2 1.0 CZ B:ARG32 4.6 62.5 1.0 ND2 B:ASN119 4.6 34.1 1.0 O B:HOH499 4.7 35.9 1.0 CD2 B:HIS38 4.7 54.7 1.0 CD1 B:TYR80 4.7 38.4 1.0 CE1 B:TYR80 4.7 39.3 1.0 NE2 B:HIS38 5.0 54.7 1.0

Chlorine binding site 7 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl478 b:76.3 occ:1.00 ND2 C:ASN301 3.2 56.2 1.0 OD1 C:ASN301 4.0 65.4 1.0 O C:LYS120 4.0 40.3 1.0 CG C:ASN301 4.0 59.6 1.0 C C:THR121 4.2 41.8 1.0 CB C:LEU122 4.2 43.2 1.0 N C:LEU122 4.2 42.0 1.0 O C:THR121 4.2 43.4 1.0 C C:LYS120 4.3 41.1 1.0 CB C:ASP83 4.4 50.0 1.0 CG C:ASP83 4.5 63.7 1.0 CA C:LEU122 4.5 43.0 1.0 OD1 C:ASP83 4.5 70.0 1.0 NH1 C:ARG284 4.6 0.0 1.0 N C:ASP83 4.7 44.3 1.0 N C:THR121 4.7 40.9 1.0 O C:LYS81 4.7 41.5 1.0 CA C:THR121 4.8 40.1 1.0 CA C:LYS120 4.9 41.5 1.0 OD2 C:ASP83 5.0 82.4 1.0

Chlorine binding site 8 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl479 b:95.0 occ:1.00 OH C:TYR39 3.7 54.6 1.0 CD C:ARG32 3.7 58.6 1.0 NH1 C:ARG32 3.7 61.9 1.0 CE1 C:TYR39 4.0 54.0 1.0 CD2 C:TYR80 4.1 43.4 1.0 CE2 C:TYR80 4.2 40.1 1.0 CZ C:TYR39 4.3 55.4 1.0 CG C:TYR80 4.3 40.6 1.0 ND2 C:ASN119 4.4 34.1 1.0 CZ C:TYR80 4.5 41.7 1.0 CD1 C:TYR80 4.6 39.9 1.0 NE C:ARG32 4.7 59.0 1.0 CG C:ARG32 4.7 59.2 1.0 CZ C:ARG32 4.7 61.8 1.0 CE1 C:TYR80 4.7 38.6 1.0 CD2 C:HIS38 4.8 54.3 1.0 CZ C:PHE117 4.9 40.7 1.0 CB C:TYR80 5.0 39.8 1.0

Chlorine binding site 9 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl478 b:62.0 occ:1.00 ND2 D:ASN301 3.5 53.4 1.0 O D:LYS120 3.9 41.6 1.0 O D:THR121 3.9 41.2 1.0 NH1 D:ARG284 4.0 99.7 1.0 C D:LYS120 4.0 41.1 1.0 OD1 D:ASN301 4.1 63.5 1.0 C D:THR121 4.1 41.2 1.0 CG D:ASN301 4.2 58.9 1.0 O D:LYS81 4.3 40.4 1.0 CB D:ASP83 4.4 44.7 1.0 N D:LEU122 4.4 41.5 1.0 N D:THR121 4.4 39.8 1.0 CB D:LEU122 4.6 40.4 1.0 CA D:LYS120 4.6 42.3 1.0 N D:ASP83 4.6 42.9 1.0 CG D:ASP83 4.7 49.5 1.0 CA D:THR121 4.7 39.7 1.0 CA D:LEU122 4.7 41.3 1.0 CD1 D:TYR146 5.0 44.4 1.0

Chlorine binding site 10 out of 12 in the Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of Putative Acetyltransferase (YP_390128.1) From Desulfovibrio Desulfuricans G20 at 2.28 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl479 b:40.7 occ:1.00 O D:HOH536 2.7 43.6 1.0 O D:HOH505 2.8 35.6 1.0 N D:TYR177 3.3 38.5 1.0 NE D:ARG176 3.4 48.7 1.0 CB D:ARG176 3.5 40.6 1.0 CD2 D:TYR177 3.5 41.9 1.0 CE2 D:PHE158 3.6 35.0 1.0 CA D:ARG176 3.6 38.9 1.0 CG D:ARG176 3.9 42.5 1.0 C D:ARG176 4.0 38.9 1.0 NH2 D:ARG176 4.0 50.5 1.0 CB D:TYR177 4.1 39.7 1.0 CZ D:ARG176 4.1 49.3 1.0 CZ D:PHE158 4.2 42.3 1.0 CD D:ARG176 4.2 48.1 1.0 CA D:TYR177 4.3 39.5 1.0 CG D:TYR177 4.3 38.0 1.0 CA D:GLY160 4.3 38.2 1.0 OH D:TYR29 4.4 45.6 1.0 CE2 D:TYR177 4.4 41.4 1.0 CE1 D:TYR29 4.7 42.1 1.0 CD2 D:PHE158 4.7 43.2 1.0 CZ D:TYR29 4.8 47.8 1.0 O D:GLN221 5.0 47.6 1.0 N D:ARG176 5.0 38.1 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.