Chlorine in PDB 3c9i: Structure of P22 Tail-Needle GP26 Bound to Xenon Gas

The structure of Structure of P22 Tail-Needle GP26 Bound to Xenon Gas, PDB code: 3c9i was solved by G.Cingolani, A.S.Olia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.95
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	40.539, 114.531, 172.045, 90.00, 91.01, 90.00
R / Rfree (%)	23.4 / 26.9

The structure of Structure of P22 Tail-Needle GP26 Bound to Xenon Gas also contains other interesting chemical elements:

Xenon	(Xe)	14 atoms
Calcium	(Ca)	2 atoms

The binding sites of Chlorine atom in the Structure of P22 Tail-Needle GP26 Bound to Xenon Gas (pdb code 3c9i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of P22 Tail-Needle GP26 Bound to Xenon Gas, PDB code: 3c9i:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of P22 Tail-Needle GP26 Bound to Xenon Gas


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of P22 Tail-Needle GP26 Bound to Xenon Gas within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2 b:28.2 occ:1.00 ND2 C:ASN1094 3.2 18.0 1.0 ND2 A:ASN1094 3.2 23.9 1.0 ND2 B:ASN1094 3.4 30.1 1.0 CB A:ASN1094 3.8 25.3 1.0 CB C:ASN1094 3.9 22.9 1.0 CB B:ASN1094 3.9 28.5 1.0 CG A:ASN1094 4.0 30.5 1.0 CG C:ASN1094 4.1 22.7 1.0 CG B:ASN1094 4.2 31.2 1.0 CG1 B:ILE1091 4.2 28.8 1.0 CG1 A:ILE1091 4.2 26.6 1.0 CA A:ILE1091 4.2 18.3 1.0 CA B:ILE1091 4.3 30.9 1.0 CG2 A:ILE1091 4.3 12.4 1.0 CG2 B:ILE1091 4.4 27.6 1.0 CG2 C:ILE1091 4.4 32.3 1.0 CA C:ILE1091 4.4 25.3 1.0 CG1 C:ILE1091 4.4 26.6 1.0 CB A:ILE1091 4.5 14.5 1.0 CB B:ILE1091 4.5 29.2 1.0 CB C:ILE1091 4.6 29.9 1.0 O A:ILE1091 4.8 18.8 1.0 O A:ARG1090 4.9 26.4 1.0 O B:ILE1091 4.9 33.9 1.0 O C:ILE1091 4.9 24.1 1.0

Chlorine binding site 2 out of 2 in the Structure of P22 Tail-Needle GP26 Bound to Xenon Gas


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of P22 Tail-Needle GP26 Bound to Xenon Gas within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl4 b:33.3 occ:1.00 OD1 D:ASN1094 3.3 27.4 1.0 OD1 F:ASN1094 3.3 22.8 1.0 OD1 E:ASN1094 3.5 23.8 1.0 CB D:ASN1094 3.7 36.0 1.0 CB F:ASN1094 3.9 20.2 1.0 CG D:ASN1094 4.0 31.9 1.0 CG1 E:ILE1091 4.0 31.1 1.0 CG F:ASN1094 4.0 23.1 1.0 CA D:ILE1091 4.1 30.5 1.0 CG1 D:ILE1091 4.1 22.6 1.0 CB E:ASN1094 4.1 29.2 1.0 CA F:ILE1091 4.2 29.9 1.0 CG1 F:ILE1091 4.2 24.4 1.0 CG2 D:ILE1091 4.2 26.6 1.0 CG E:ASN1094 4.2 27.1 1.0 CA E:ILE1091 4.2 37.0 1.0 CB D:ILE1091 4.4 23.3 1.0 CG2 F:ILE1091 4.4 24.9 1.0 CB E:ILE1091 4.5 35.1 1.0 CG2 E:ILE1091 4.5 30.9 1.0 CB F:ILE1091 4.5 25.9 1.0 O D:ILE1091 4.6 32.8 1.0 O F:ILE1091 4.8 31.2 1.0 C D:ILE1091 4.9 30.1 1.0 O E:ILE1091 4.9 32.6 1.0 O D:ARG1090 4.9 39.6 1.0 CD1 E:ILE1091 5.0 27.4 1.0

A.S.Olia, S.Casjens, G.Cingolani. Structural Plasticity of the Phage P22 Tail Needle GP26 Probed with Xenon Gas. Protein Sci. V. 18 537 2009.
ISSN: ISSN 0961-8368
PubMed: 19241380
DOI: 10.1002/PRO.53