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Chlorine in PDB 3cdv: Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme

Enzymatic activity of Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme

All present enzymatic activity of Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme, PDB code: 3cdv was solved by B.H.M.Mooers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.23 / 1.73
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.943, 60.943, 97.511, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme (pdb code 3cdv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme, PDB code: 3cdv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3cdv

Go back to Chlorine Binding Sites List in 3cdv
Chlorine binding site 1 out of 2 in the Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl168

b:26.3
occ:1.00
N A:ARG145 3.2 11.6 1.0
N A:ASN144 3.3 7.3 1.0
C A:THR142 3.5 19.5 1.0
CB A:ASN144 3.5 5.8 1.0
CA A:THR142 3.7 9.1 1.0
CA A:ASN144 3.7 10.1 1.0
O A:THR142 3.7 13.0 1.0
CB A:THR142 3.8 11.0 1.0
C A:ASN144 3.9 18.9 1.0
CB A:ARG145 3.9 12.6 1.0
N A:PRO143 3.9 14.7 1.0
CA A:ARG145 4.2 10.7 1.0
C A:PRO143 4.2 9.9 1.0
CD A:PRO143 4.3 13.7 1.0
CG A:ASN144 4.5 33.5 1.0
CG2 A:THR142 4.5 11.7 1.0
O A:HOH230 4.6 31.1 1.0
CA A:PRO143 4.6 7.8 1.0
OD1 A:ASN144 4.7 35.6 1.0
O A:HOH245 4.9 39.9 1.0
OG1 A:THR142 4.9 15.0 1.0
O A:HOH237 5.0 30.0 1.0

Chlorine binding site 2 out of 2 in 3cdv

Go back to Chlorine Binding Sites List in 3cdv
Chlorine binding site 2 out of 2 in the Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:33.5
occ:0.50
O A:HOH215 3.0 19.1 1.0
C A:LYS135 3.6 8.3 1.0
CA A:LYS135 3.8 19.4 1.0
N A:SER136 3.8 6.0 1.0
O A:LYS135 4.1 17.1 1.0
OD1 A:ASN140 4.1 20.7 1.0
CB A:LYS135 4.2 14.9 1.0
CA A:SER136 4.5 5.7 1.0
O A:HOH220 4.5 46.6 1.0
C A:SER136 4.7 9.5 1.0
O A:SER136 4.8 12.3 1.0

Reference:

B.H.Mooers, W.A.Baase, J.W.Wray, B.W.Matthews. Contributions of All 20 Amino Acids at Site 96 to the Stability and Structure of T4 Lysozyme. Protein Sci. V. 18 871 2009.
ISSN: ISSN 0961-8368
PubMed: 19384988
DOI: 10.1002/PRO.94
Page generated: Sat Dec 12 09:36:02 2020

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