Atomistry » Chlorine » PDB 3ccm-3cjx » 3cfr
Atomistry »
  Chlorine »
    PDB 3ccm-3cjx »
      3cfr »

Chlorine in PDB 3cfr: Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2

Enzymatic activity of Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2

All present enzymatic activity of Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2:
2.7.7.7;

Protein crystallography data

The structure of Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2, PDB code: 3cfr was solved by J.Wang, D.Klimenko, M.Wang, T.A.Steitz, W.H.Konigsberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 74.958, 119.769, 130.430, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 26.6

Other elements in 3cfr:

The structure of Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2 also contains other interesting chemical elements:

Calcium (Ca) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2 (pdb code 3cfr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2, PDB code: 3cfr:

Chlorine binding site 1 out of 1 in 3cfr

Go back to Chlorine Binding Sites List in 3cfr
Chlorine binding site 1 out of 1 in the Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Replicating Complex of A Pol Alpha Family Dna Polymerase, Ternary Complex 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl915

b:55.3
occ:1.00
NZ A:LYS483 3.6 37.8 1.0
CD A:ARG482 3.7 27.2 1.0
NH1 A:ARG482 3.8 26.7 1.0
CG2 A:THR413 3.9 27.2 1.0
CA A:LYS483 3.9 31.2 1.0
CG A:LYS483 3.9 34.5 1.0
CB A:LYS483 3.9 33.2 1.0
NE A:ARG482 4.0 27.2 1.0
CE1 A:PHE479 4.0 21.6 1.0
CZ A:ARG482 4.0 28.9 1.0
CD A:LYS483 4.1 36.7 1.0
CD A:LYS486 4.1 26.1 1.0
CZ A:PHE479 4.4 19.4 1.0
N A:LYS483 4.4 29.7 1.0
CE A:LYS483 4.4 39.3 1.0
OG A:SER414 4.6 34.5 1.0
O2G A:TTP916 4.8 29.0 1.0
NZ A:LYS486 4.8 26.9 1.0
CD1 A:PHE479 4.9 23.4 1.0
NH2 A:ARG482 4.9 27.7 1.0
CB A:LYS486 4.9 25.2 1.0
C A:ARG482 5.0 28.7 1.0

Reference:

D.Klimenko, M.Wang, T.A.Steitz, W.H.Konigsberg, J.Wang. Insights Into Base Selectivity From the Structures of An RB69 Dna Polymerase Triple Mutant To Be Published.
Page generated: Sat Dec 12 09:36:16 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy